Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0538 ATGGGGAGTGGAGTGAACAGAAAACTTTCTGCAGCATCAACCCGTGCTCATTCCTCGAACCAAAACAAAACCACTTCAGTTCACTTCCCTTCAGGAATTTTGAGAACAGTGTTCGCTGTACTGTTCATCGTGCTCGTAGCATGGGGTTATCAGGCAATTCAACCTCCTCCATCAAAGTTGTGTGGTTCTCCTAGTGGCCCCCCTATAACAGCACCCAGAATCAAGCTAAGAGATGGACGGAATTTAGCATACAAAGAGCATGGTGTTCCAAAAGATGTAGCCAATCACAAAATCATCTTTGTTCATGGTTTTGATGCTTGCAGGCATGATGCCTATGTTGCAAAAACCTTATCACCTGATGTTGCTGAGGATTTAGGGGTCTACATTGTATCTTTTGACAGACCAGGGTATGGAGAGAGTGATCCTCATCCAAGCCAAACAGTGAAGAGCTTGGCATTAGATATAGAAGAACTTGCTGATAAATTGGGACTAGGATCCAAATTCTACATAATAGGTTTCTCTCTTGGGGGTCAGGTTGTTTGGAGGTGCCTTAAGTACATCCCTCACAGGTTGGCAGGTGCGGTGCTGATAGCCCCAGTGTTGAACTACTGGTGGACTGGTCTTCCTAGAAACTTAACAAATGAAGTCTTTTACCGACAAAAACTACAAGACCAGTGGACACTTGGTGTTGCTCACTATATACCTTGGCTAACTTACTGGTGGAACACTCAAACATGGTTTCCATCTTCTTCTTTAATTGCTGACAGTTTAGATCTTCTTTCCCTTCAAGACAAAGAACTTTTGCCTAAGAGGAAAGATCGAAAGAATCATGTGGGTGAGGTAAGACAGCAGGGAGAACATGAAAGTGTACACAGAGATCTAATTGTTGCATTTGGTAGCTGGGAATTTAGTCCTTTGGATCTGGAAAATCCATTTCCAAATAAAGAGGGTTTGGTTCATATTTGGCAAGGAGATCAAGATTTGATAGTGCCTGTTAAAGTGCAAAGATACATTGCACAAAAGCTTCCATGGATTCAATATCACGAGCTTCAAGGTGCTGGCCATTTGTTCCCTCATCTTGATGGTATCAGTGATACCATTGTTAAGTCACTTTTAAATGCCCAGTAG 1128 0.4255 MGSGVNRKLSAASTRAHSSNQNKTTSVHFPSGILRTVFAVLFIVLVAWGYQAIQPPPSKLCGSPSGPPITAPRIKLRDGRNLAYKEHGVPKDVANHKIIFVHGFDACRHDAYVAKTLSPDVAEDLGVYIVSFDRPGYGESDPHPSQTVKSLALDIEELADKLGLGSKFYIIGFSLGGQVVWRCLKYIPHRLAGAVLIAPVLNYWWTGLPRNLTNEVFYRQKLQDQWTLGVAHYIPWLTYWWNTQTWFPSSSLIADSLDLLSLQDKELLPKRKDRKNHVGEVRQQGEHESVHRDLIVAFGSWEFSPLDLENPFPNKEGLVHIWQGDQDLIVPVKVQRYIAQKLPWIQYHELQGAGHLFPHLDGISDTIVKSLLNAQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0538 375 Pfam alpha/beta hydrolase fold 98 356 IPR000073 -
Vra3g0538 375 MobiDBLite consensus disorder prediction 1 25 - -
Vra3g0538 375 Gene3D alpha/beta hydrolase 62 373 IPR029058 -
Vra3g0538 375 SUPERFAMILY alpha/beta-Hydrolases 65 358 IPR029058 -
Vra3g0538 375 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 373 - -
Vra3g0538 375 MobiDBLite consensus disorder prediction 6 25 - -
Vra3g0538 375 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 6 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0538 Vra-Chr3 6052499 6055145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0538 - - gmx:100776687 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0538 3 6052499 6055145 Vra8g0674 8 11716917 11720956 PCT