Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0525 ATGGAGGTCTCAGACGACGAAGACGAGCACGTTTTCCTTGTTTGTACTAACACTGATTCAATTCAAACAACCGAAACCCTAAACGATGAGATTCTCCTGTCCACCGCCGATATCCTCTCTTGGGATCTCCCAACGATTCTCACTTTTCCGACGATTAAAGTTCAGGCACATTCCAATAGGCTCATTGAACAATCTATGTATTTCAGCGGCCTCCTCAGCGGGAACTTCAGTGAATCATGCTTGGGTTCTATCTCTATCAATTGGAATGTGAACGATTTTTTGCAAATTCTTAAGCATATGTGTGACTGCGTTTTGGATATTACATTGGATAACTTCTTCCCTCTTTATGAGGGTGCACTTTATTTTGGAGTGGAATCACTTCTCTTGAAGTGTGAGATGTGGCTTTCTGAGGTGCTCTCACCCGAAGGATTTCAATCTACTCAAATAAAAATGGAGGACTTGATCCAAATTTGGAAATTTGGCTCAGATCGTGCCAGCGACTATATCCTGCACTTATGTATGGGCTACCTGGCAAGGAATTTTATGTGGGCAAAGTGTAGCAAATTTTTTGTAAAACTTCCATACGACCTGCTGTTATCTTCCGTAAAGCACCCTCATTTGACTGTTGACAGTGAACTGCATCTTTCTGATGCACTTCTTCTCTGGCTTGAAAGTAACTTGGAAAGTTTGGAGAGGCCAAGTAAAACTGAAGACAATTGCATCGAAATTTTGAAACAAAAATTCCTAGATGTTGTAAGACTACTAAATATTGTTCCTATGGGTTCACTAGATACTTTCAAGTATAGTGACTTGTATCAACTCAAGATTAGGTTGACAGAATATTCAAAGAAAGTGAACCTTTCTGGTTGCCCGCAAATAACATCTACAATACTTCGACTGTCACTCATCCCTCAATCACATTTAACAGATCCTATGCAAAAGAAGATTATAGAAAAGTTATTTATTAGTTGTGAACATCCTGTAAGAGATAGATGCGTGTTTCCACAAAATCTGTCAGAAGAAACCATGACCTTTGAAGCAGTTCAGGAGGTGGATATCTCTAACTGTCAAAATTTGCATGTTGAACTTGCTGTTGACTGCTTCCGCAAATCCTTTCCTTCCTTAAGAACATTGAAAGCAGGTTATCTTTTGAACATTGGGACAACCACCTTCCTTCAGTTATTGGAGAAATGTCCGCTGGTTTGTGAAATTGACTTGACTGTTGATATTACCCCATTGATTCCAGCATCAGTTACAGTTTTATCCTCTAGTCCCGCTGAGATACAGCCAGTGCCAGAGAAGACCTCTAGTGTTAAATATGAAGCAGTGCAAATCATGTCATTTAATGAATTTGGACCTCCTCTTTCTAATGTTACAAAACTCACATTGGAAGGAAGAACTGATGTCAGTGATTTGGGTCTCCATTACATCTCCAAATTATGTGTTTCTTTGTGTCACCTGAATATTAAAGGATGCATTTCTGTTACTGATATTGGCATATCAGATCTCATATCAACGAGTAAAAAACTTAATTCAATTGTGGTTTGTGATACTTTGTTTGGGATAAATAGTGTTCAAGCTCTTTGCTCAGCTATTTCTGATAGTGGCAACACCTCCTCTCTACATTCTAGAGATAAACGTTTGAATTCTGTGGTGTCTAATTTTGAAACATTGCATATGGGTGGCTGCCAGGGTGTTTCTAAGTCATCTCTAATGGAGCTTATGTCTCAAACACAAGTTTTGAAGAGTTTATGCCTGAGAGGAACTGATCTGATTGATCAGGCACTGTATAATTTTGTAGGTTCTTCCTTGGAGATGCTTGATATTTCAAATACTAAGATCTCTATTGCTGCATTAGCTTATGTTATTCAAGGAAATTCAAGTTTAAAGTGTCTGAAAGCAAGAGACTGTCGAAATTTGTTTCCTGTAGACAATTGTACTGAAATAAGAGAATCTGATTTCCCTTCCTTGCATGAGAAACTACATGCTGAGTTAGGAAAAAGGAAGAGATTGGAAGAGATTGAGTTTGGATGGGGTTTTTCTTCCTTCTCTTTTAGTTCTCTGGAACCTGCACTAATGTCATTAAAGGCCATCAATATTGGTTTAGGTGGAACGCTAGGTGAAGATGCTTTGAAACGGTTACCTGCAGTTTGTCCCTTGCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATATAATTGTGATGAACATTGCTGCATCCTTGAAAAACTTGCAAGTATTAGCTTTGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCGATGCAAAGTCTTAGAAAGTTGAGGCTTGAAAGAGTAACCCCATGGATGACAAATGATGATTTGGTTGTTCTCACTCAAAACTGCAGAAATTTGGCTGAGCTTTCATTGCTAGGGTGTTCTCTTCTTGACTCAGACTCTCTACCAATAATTTCATGTGGATGGTCAGGCTTGGTCTCTATCCATTTAGAGGAGTGCGGAAAAGTAACAGCTAATGGGGCCTCCGCTCTTCTTGACTGCAAAGCTCTTGAAGATATCCTGCTGCGTCATAATGGCCCTGGGCTATGCAGAAACTTCATTGGTTATGCTGCTTCAGAGATGCCAATGCTTCGAAAATTGTCACTGGATATATGCGATGCGAGGGAAGGTGATTTTGACATTCCAAATTATGCAGGCAGATACTCTTTGAGTACCTTAAACATAGCTAGATGCAAATCTCAAAGATGTGCATTTAATGTCCCAACCTCTACCTCAGGGGCTCGCAGTAGATCCGTGCATATGGAAACTCTGGTACTCGTGTGGAACAGCAGAGATCTCATCAGAACAGTGGTGAAGGAAAGACTTTAG 2862 0.3952 MEVSDDEDEHVFLVCTNTDSIQTTETLNDEILLSTADILSWDLPTILTFPTIKVQAHSNRLIEQSMYFSGLLSGNFSESCLGSISINWNVNDFLQILKHMCDCVLDITLDNFFPLYEGALYFGVESLLLKCEMWLSEVLSPEGFQSTQIKMEDLIQIWKFGSDRASDYILHLCMGYLARNFMWAKCSKFFVKLPYDLLLSSVKHPHLTVDSELHLSDALLLWLESNLESLERPSKTEDNCIEILKQKFLDVVRLLNIVPMGSLDTFKYSDLYQLKIRLTEYSKKVNLSGCPQITSTILRLSLIPQSHLTDPMQKKIIEKLFISCEHPVRDRCVFPQNLSEETMTFEAVQEVDISNCQNLHVELAVDCFRKSFPSLRTLKAGYLLNIGTTTFLQLLEKCPLVCEIDLTVDITPLIPASVTVLSSSPAEIQPVPEKTSSVKYEAVQIMSFNEFGPPLSNVTKLTLEGRTDVSDLGLHYISKLCVSLCHLNIKGCISVTDIGISDLISTSKKLNSIVVCDTLFGINSVQALCSAISDSGNTSSLHSRDKRLNSVVSNFETLHMGGCQGVSKSSLMELMSQTQVLKSLCLRGTDLIDQALYNFVGSSLEMLDISNTKISIAALAYVIQGNSSLKCLKARDCRNLFPVDNCTEIRESDFPSLHEKLHAELGKRKRLEEIEFGWGFSSFSFSSLEPALMSLKAINIGLGGTLGEDALKRLPAVCPLLETIILHFQVISDIIVMNIAASLKNLQVLALCYCFGDISMSSFKFPMQSLRKLRLERVTPWMTNDDLVVLTQNCRNLAELSLLGCSLLDSDSLPIISCGWSGLVSIHLEECGKVTANGASALLDCKALEDILLRHNGPGLCRNFIGYAASEMPMLRKLSLDICDAREGDFDIPNYAGRYSLSTLNIARCKSQRCAFNVPTSTSGARSRSVHMETLVLVWNSRDLIRTVVKERL* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0525 953 Gene3D - 149 253 - -
Vra3g0525 953 CDD BTB_POZ_ZBTB_KLHL-like 51 122 - -
Vra3g0525 953 SUPERFAMILY RNI-like 337 754 - -
Vra3g0525 953 SUPERFAMILY RNI-like 661 910 - -
Vra3g0525 953 SUPERFAMILY POZ domain 50 136 IPR011333 -
Vra3g0525 953 SMART LRR_CC_2 794 819 IPR006553 -
Vra3g0525 953 SMART LRR_CC_2 552 577 IPR006553 -
Vra3g0525 953 SMART LRR_CC_2 455 480 IPR006553 -
Vra3g0525 953 SMART LRR_CC_2 481 506 IPR006553 -
Vra3g0525 953 SMART LRR_CC_2 718 742 IPR006553 -
Vra3g0525 953 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 60 848 - -
Vra3g0525 953 Gene3D Potassium Channel Kv1.1; Chain A 16 141 IPR011333 -
Vra3g0525 953 PANTHER UNCHARACTERIZED 60 848 - -
Vra3g0525 953 Gene3D Ribonuclease Inhibitor 534 929 IPR032675 -
Vra3g0525 953 Gene3D Ribonuclease Inhibitor 269 533 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0525 - - gmx:100791594 1461.05