Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0518 ATGGATATGGAGGAAGAAGCCAATGATCACCACACAATAGACATATGGAAGGTAATAGACAGAGAGAGGTTGGCGTCGATGGAGCTGAAGATTTCGGAGAATCCCAAGTTGCTAAGCAAATCGGCGGGGAAGAGATCGTGCTGCATCTTCAGGGTCCCGCAGAGCCTAATCGAGGTCAACGGAAAAGCCTACCAACCTCGCATCGTGTCCATAGGACCATACCACCGTGCCCAACCTCGTCTCAACATGATCGAGGAACACAAGTGGCGTTACCTCGGTTCCCTTCTCAACAGAACCAAAACCAAAGCTTTTGGCTTAGATGATTTATTCAAAGCCCTTGCGCCTTTAGAATCCGAAGCCAGAGAGTGCTATTCAGAAACCATCCCCCTTGACTCTCACGACTTCATCCAGATGATGATCCTCGACGGCTGTTTCATCGTTGAGCTCTTTCGCAAAGTCGTTGGATTAGTACCCTTTGAACGCGACGATCCTCTTGTTACCATGGCCTGGATATTACCCTTCTTTTACCGAGATTTTCTCAAGCTTGAAAACCAGATCCCGTTCTTCGTTCTGAACCAGTTATTCCAAGTTACAAAACTCCCGGGAGAAAAGTCAACGTGGAATCTGTCAACTCTGGCTATGATGTTCTTCAACAACTCGTTACAAAGACCAGACGATGTTGCTGGCTGGGCAAACGTGAATGGAAAACACTTACTCGACTTGGTTCGTTCCAGTTTCATTCCGAACCACGCAGAAACTAGAGAGCCAAGAAAAGGATTCACCACGCCGACCCACGTGATCCACTGCGTCTCTAAGCTTCGTAGAGCCGGGATTAAGATCAGCCCCGGCAAGGAAAACGAGAGTTTCCTTCACGTGACGTTCAGGCGCGGCGTGATTGAAATGCCATCGCTTACAATGGACGATTTCATGAGTTGCTTTTTGCTGAACTGCGTGGCGTTTGAGCAGTGCTACGGTGGCTGCTCCAAGCACTTCACAGCCTATGTTACTCTCTTGGACTGTCTCGTGAACACTTACAGAGATGTTGAGTATTTGTGTGAACGGAACGTGGTCGAGAACCACTTTGGGACTGAAGGAGAAGTTGCCAGCTTCATCAACAACGCCGGAAAAGATGTGGCGGTTGATTTGGATTTGTGTTATTTGTCTCAGCTGTTCAATGATGTTCATAGATATTACAGAAATAGTTGGCATGTTCAGTGGGCTAGCTTCAAGTACACTTACTTTGACACGCCATGGTCGTGTATCTCTCTTCTTGCGGCCTCCATATTGCTGCTTCTCACGGTGGCTCAGACCTACTTTGCGGCTTCTCAGTATTTTGAAGACTCCGAAAAGCATTGA 1356 0.4771 MDMEEEANDHHTIDIWKVIDRERLASMELKISENPKLLSKSAGKRSCCIFRVPQSLIEVNGKAYQPRIVSIGPYHRAQPRLNMIEEHKWRYLGSLLNRTKTKAFGLDDLFKALAPLESEARECYSETIPLDSHDFIQMMILDGCFIVELFRKVVGLVPFERDDPLVTMAWILPFFYRDFLKLENQIPFFVLNQLFQVTKLPGEKSTWNLSTLAMMFFNNSLQRPDDVAGWANVNGKHLLDLVRSSFIPNHAETREPRKGFTTPTHVIHCVSKLRRAGIKISPGKENESFLHVTFRRGVIEMPSLTMDDFMSCFLLNCVAFEQCYGGCSKHFTAYVTLLDCLVNTYRDVEYLCERNVVENHFGTEGEVASFINNAGKDVAVDLDLCYLSQLFNDVHRYYRNSWHVQWASFKYTYFDTPWSCISLLAASILLLLTVAQTYFAASQYFEDSEKH* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0518 451 PANTHER - 10 441 - -
Vra3g0518 451 Pfam Plant protein of unknown function 49 432 IPR004158 -
Vra3g0518 451 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 10 441 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0518 Vra-Chr3 5829752 5831491 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0518 - - gmx:100789486 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0518 3 5829752 5831491 Vra3g0518 3 5829752 5831491 ECH