Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0514 ATGAGAGGCATAGCATCTTGTTACAACGAACATGCTATTAGAGTGTCCGATTCATATTGTTCGAGGCCTTCAAACCAGACCTATCTCTGTCCAAAACTGAATCCTTCCACCAGAGATTCAGTCACCTGCATGTACAAAATCTCAACGCAAAAACAACTTTTCATCACACTAACTTGGGCCAAGAAACTCCTAGGTCAAGCCTTCACCATAACCATCTCCAATTCCGATCATTTTCCCTCCAAATTCAACGCAAAGCAATTGAATAAAACCAAAGGAAACGAAACATTCCGAACCCACAATTTCCAAATCCAAGTCCTCTGGGATCTCTCCAACGCTAAGTACGAGGATGGGCCAGAACCGGTTAACGGATTTTACGTCGTCGTTTTGGTGGACTCCGATTTGGGCCTACGCCTCGGTGACAAAGATCCCTTACTTGAAGAACAATCAGACACAAAGGAAGCGAATTTCTCAATGGTTTCAAGGAGTGAGACGTTTTCCGAAACCGCGGTTTACGCGACAAAGGCGAAATTTTGCGAGACGGGAATTTCTCATGACATATTGATAAAGTGCTGCGCGGAAGAGGGAGCGTCGAAGGGTCACGTGTTGTCCGTGTGGGTGGACAAGAAGACAATGTTCCAGGTGAAAAGGTTGCGCTGGAACTTTCGTGGGAACCAAACAATCTTTGTGGATGGTTTGGTCGTGGATATGATGTGGGATGTGCATGATTGGCTTTTCAATCCCGATTCTGCTTCAGCAATGTTCATGTTCAGGACAAGGAGTGGCCTCGACAGTAGATTATGGTTGGAGGAGAAGACTTCGCACACGCGCAACCAGCAGGACAAAATCGGCTTCTCCTTGTTCATACGTGCATTTTTTTTCTTCTTAATATCAACTGTTCATGATCTTTCGTCAGTGGCCATGTGTCATTGTTCCCGTTTGAACAGGACTAGATGA 954 0.4539 MRGIASCYNEHAIRVSDSYCSRPSNQTYLCPKLNPSTRDSVTCMYKISTQKQLFITLTWAKKLLGQAFTITISNSDHFPSKFNAKQLNKTKGNETFRTHNFQIQVLWDLSNAKYEDGPEPVNGFYVVVLVDSDLGLRLGDKDPLLEEQSDTKEANFSMVSRSETFSETAVYATKAKFCETGISHDILIKCCAEEGASKGHVLSVWVDKKTMFQVKRLRWNFRGNQTIFVDGLVVDMMWDVHDWLFNPDSASAMFMFRTRSGLDSRLWLEEKTSHTRNQQDKIGFSLFIRAFFFFLISTVHDLSSVAMCHCSRLNRTR* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0514 317 PANTHER FAMILY PROTEIN, PUTATIVE (DUF868)-RELATED 1 290 - -
Vra3g0514 317 Pfam Plant protein of unknown function (DUF868) 37 291 IPR008586 -
Vra3g0514 317 PANTHER EXPRESSED PROTEIN 1 290 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0514 Vra-Chr3 5779517 5780993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0514 1 291 EF-hand Containing Proteins AT5G28150 34.899 7.75e-53 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0514 - - vun:114184394 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0514 3 5779517 5780993 Vra3g0514 3 5779517 5780993 ECH