Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0504 ATGGCTGCATCTCTAACTACATTCTCCAGGCTTATCTCTTCCACCACCGTCTCTCTCCTCCCTCCCAAAACCCTCACTTCCAAAATCTCTATTCGCCTTCCCGCTCGCCGCCAAGCCAAGCCCCTCAGATTCTCCTCCTCCTCCTCCTCCCCCATCACCGCTGCCATCGGCGTCGGCGATAAGCTCCCGGAGGCCACCTTCTCCTACCTGGATTCGGATGGAGAGGTGAAGACGACGACGGTGTCGGAGCTGACGAAGGGGAAGAAGGCGGTGTTGTTCGCGGTGCCGGGTGCGTTCACTCCCACGTGCTCACAGAAGCACGTGCCAGGGTTCGTGGAGAAGTCGGGGGAGCTGAAGGCGAAGGGGGTGGAGACCATTGCATGCATTTCGGTGAACGATGCTTTCGTGATGAAGGCTTGGAAGGAGGACCTCAAGGTTAACGACGAGGTGCTCCTGTTGTCCGATGGAAACGGAACGTTCACGAAAGCCATTGGGTGCGAGCTCGATCTCAGCGACAAGCCCGTTGGGTTGGGGGTTAGGTCGAGGCGCTACGCTCTCTTGGCCGAGGATGGGGTTGTGAAGCTCTTCAATTTGGAGGAAGGGGGTGCCTTCACTTTCAGTGGCGCTCAGGACATTCTCGATGTCCTTTGA 651 0.5791 MAASLTTFSRLISSTTVSLLPPKTLTSKISIRLPARRQAKPLRFSSSSSSPITAAIGVGDKLPEATFSYLDSDGEVKTTTVSELTKGKKAVLFAVPGAFTPTCSQKHVPGFVEKSGELKAKGVETIACISVNDAFVMKAWKEDLKVNDEVLLLSDGNGTFTKAIGCELDLSDKPVGLGVRSRRYALLAEDGVVKLFNLEEGGAFTFSGAQDILDVL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0504 216 PANTHER PEROXIREDOXIN 12 215 - -
Vra3g0504 216 CDD PRX5_like 58 213 IPR037944 -
Vra3g0504 216 SUPERFAMILY Thioredoxin-like 56 214 IPR036249 -
Vra3g0504 216 Pfam Redoxin 58 200 IPR013740 GO:0016491
Vra3g0504 216 PANTHER PEROXIREDOXIN 12 215 IPR037944 -
Vra3g0504 216 Gene3D Glutaredoxin 54 216 - -
Vra3g0504 216 ProSiteProfiles Thioredoxin domain profile. 56 216 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0504 Vra-Chr3 5668321 5669306 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0504 - - gmx:100783307 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0504 3 5668321 5669306 Vra3g0504 3 5668321 5669306 ECH