Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0498 ATGGGGGGTGAAACGGTGAACGGCTCATGGTTCAGTTCTTTGTGGCCAGTCTCTCGGAAGAGTACATCATCCGATAACAAGGCTGTGGTGGGAATTTTGGCATTAGAAGTCACAGGGTTGATGTTGAAGGTGGTTAATTTATGGCAGTCTTTGAGTGATAGGGAGGTATTGAGTCTGAGGGAAGGGATTGTGAATTCAATTGGAGTCAAAATGCTGGTGTCTGACAATGATGATTACTTGATGGAACTTGCGATGAATGAGATACTTCATAACTTTCAATCTCTTGCACGCTCGGTGGCTAGGTTGGGTAAGAAATGCGTGGATCCGGTTTATCATCGTTTTGAACATTTTGTTCATAACCCAGCTCAAAATTATTTGCAATGGTCTGGGTGGGAGTATAGGTGGAAAAAGATGGAGAGGAAAGTGAAGAAAATGGAAAAAATTATTGCTGCTACGACACATTTTTGCGAAGAGGTTGAGGTGCTAGCAGAGGTTGAACAGACTTTCAGAAGAATGCAGGCAAATCCGGAATTGCATCGGGTGAAATTGCTTGAGTTTCAGAAGAAGGTTATGTTGCAGCGGCAGGAAGTGAGAAATCTCAGAGACATGTCTCCATGGAATAGAAGTTATGATTATGTTGTCCGGTTGTTGGCGAGATCACTATTTACGATCCTGGAGAGGATTGTACTTGTCTTTGAAAACAAACACCCACCAACTGTCCAACCATATAATGATTCTATGCATATGAGTTCTAACAATCTTCTGCGAAGTCATTCCTTTTCTGTTATGCATTCATCTGTTTATCCTTCAGAGAATAATCTCTACGGATTGAATTCAGGTACTGTTGGGGGGAGGCCGGTATTAAACTCGGGCTTTTTAGTAGGAAAGGGGAAAAGAACGAAGAGACAGCACCAGAAAGAAGAACCTCTTTTCTTCAGAAAGAACACACATTCAGAAAGCAAGCACTTAGGACATATTATGGGCTTCAAAGGTTGTATGTCTGCTGCAGATGGTTCTCCTGTCATACAGAGCTGTATGCAGACAAATGGTGGCTCCATGAGGTTGACTGATTGTCATTTGAAATCTGTTGATAAAATGAAAACCGTGAATGAGTTATCTCTCCCCAACAGAGTTAGAATATATTCTAAGTTATCCATCAATAACCTGTTAAAGCCTGCTTCCAAATCCCTTGGTGATGCAGCTCTTGCCCTGCATTATGCCAACATGATTGTATTGATTGAGAGGATGGTGACATCACCGCACCTGGTTGATCTTGCCACAAGAGATGATCTATACAGTATGCTTCCAACTACCGTAAGAACTGCTGTAAGGGCTAAGCTTAAAAGTAAATCTTCCTCCAATCATCATGATGCAAACCTTGCTGCAGAATGGAGTATGCTACTTGCACAGATGTTGGAATGGTTGGCCCCACTGGCACATAACATGATAAACTGGCATTCTGTGAGAAATTTTGAGAAGGAGAACTCAATTTTTAGCGCAAATGTTTTACTTGTTCAAACTCTTTACTTTGCAAACCAAGCAAGAACCGAGGCTGCAATAGTTGATCTTCTTGTTGGTCTTAACTATGTGTGCAGAATTGATACAAAAGTTGGCACAAGAGATACACTGGATTGTGCAAGGACTAGAACTTTTAATGGTGTTCGTTTAAGAAAGAATGGAATGTACAATGAAATTTTATAG 1701 0.4115 MGGETVNGSWFSSLWPVSRKSTSSDNKAVVGILALEVTGLMLKVVNLWQSLSDREVLSLREGIVNSIGVKMLVSDNDDYLMELAMNEILHNFQSLARSVARLGKKCVDPVYHRFEHFVHNPAQNYLQWSGWEYRWKKMERKVKKMEKIIAATTHFCEEVEVLAEVEQTFRRMQANPELHRVKLLEFQKKVMLQRQEVRNLRDMSPWNRSYDYVVRLLARSLFTILERIVLVFENKHPPTVQPYNDSMHMSSNNLLRSHSFSVMHSSVYPSENNLYGLNSGTVGGRPVLNSGFLVGKGKRTKRQHQKEEPLFFRKNTHSESKHLGHIMGFKGCMSAADGSPVIQSCMQTNGGSMRLTDCHLKSVDKMKTVNELSLPNRVRIYSKLSINNLLKPASKSLGDAALALHYANMIVLIERMVTSPHLVDLATRDDLYSMLPTTVRTAVRAKLKSKSSSNHHDANLAAEWSMLLAQMLEWLAPLAHNMINWHSVRNFEKENSIFSANVLLVQTLYFANQARTEAAIVDLLVGLNYVCRIDTKVGTRDTLDCARTRTFNGVRLRKNGMYNEIL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0498 566 PANTHER BNAC09G50660D PROTEIN 3 561 - -
Vra3g0498 566 PANTHER PLANT/T32M21-140 PROTEIN 3 561 - -
Vra3g0498 566 Pfam Domain of unknown function (DUF3475) 32 88 IPR021864 GO:0045927
Vra3g0498 566 Pfam Protein of unknown function (DUF668) 397 483 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0498 Vra-Chr3 5619302 5621882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0498 - - gmx:100809482 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0498 3 5619302 5621882 Vra3g0498 3 5619302 5621882 ECH