Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0483 ATGGAAAACTCAACATCAAAGCATGAGGTCCTGAAGCCAGTGATCCTCAAAGCAGGTGTTCCTTTGGCTGTGTCTTTTGCTGGTTTTGTCTATGCTTGGTTCGTGGCAAAGAAAAGCCTCTCTAAAACCTCTTCTTTATCACCAAATGGAGCAAGTTCCCATGAAAGCGATTCCCATCACGACCCTTCATATGAAGAAAGTTGTCATAGCCATAGCCTCTCTTGTATGGAAGATGAAGGAAATAGTACAACTTTGGATGAAAGTGTTGTTGCTGAAAGTTTTCTGATCCCTGACATCCCATGTTTAGAAGAGGAGATTAATGGCTTAAGAAGCAGGATTGAGGGTATGCAAATGAAAGAGTTGGCCTTGCGTTTGCAGTTTGATCGTTATTGTGGGTTGAAAGAGCAAGAAATGGTGGTTGGGGAGATCAAAAACATGTTGTCACTTGAGACTGCTCGAGTTGACTTCTTGGATAGGGAGATTTCATCGGTGGAGACACAGAATAGGAGGTTGGAGAGTTTTGCTGCTCAATATCTCAGAGTTGTAGAACAGATTGAGCGTTTGAAATCTGAGAATAGAATGCTTCGGAGGAAATTTCAGAAGCTAACGAGGAAATCAAAGGCACAAACCCGCGTGGCCAAGGAGCAGGCTTTGAAGATAAAAATGGAAGAAGAAGAAATCTTGAGAAGCCGTGATGCCTTGGAAACAAAAGTTGATGTCATAGGTAAATTAGAGGATAAAATGGAAGAGCTGAAGAGGGATTTGGATCAATTGCAGAATGAAAAGAATGAACTTCTGAAGAAGCTTGACACAGCAGAAAAATCACATGCTTCAAGGATTGAAGGTGGAGATGTAAGTAGGGAAGAGTACAAACAGGTTGTGGATGAACTAGAGCAGATGAAGAAAGAACGAGCAGATGAAGCAAAAGAACTGATTTACTTGCGGTGGACCAATGCCTGTTTAAGGCATGATCTAAAGAGGCCTCATGAACAACAACAGGATCAAGATAAAATCCATTCAGAATTGGAATTTGGAAGAAATGATGTGGTCATCCATTATGACTCAGAGCACGAACTACACAGCGATCCTTCCTTTGATGAACATCGTGGTGGCCATGATCACAGTGACAGTGGTTCTTCAAAAAGGACAAAGTTGCTTGAAAGGCTCAAGAGATGGGTGGAAGGCAGTGAAAAGGCTAGAGTTAGGCATTCTGTTTCCAAAGGGACAGAAGAAAATGTAGTTCCTAGAAGGAAATCATGTTCTAGTGCTTGA 1272 0.419 MENSTSKHEVLKPVILKAGVPLAVSFAGFVYAWFVAKKSLSKTSSLSPNGASSHESDSHHDPSYEESCHSHSLSCMEDEGNSTTLDESVVAESFLIPDIPCLEEEINGLRSRIEGMQMKELALRLQFDRYCGLKEQEMVVGEIKNMLSLETARVDFLDREISSVETQNRRLESFAAQYLRVVEQIERLKSENRMLRRKFQKLTRKSKAQTRVAKEQALKIKMEEEEILRSRDALETKVDVIGKLEDKMEELKRDLDQLQNEKNELLKKLDTAEKSHASRIEGGDVSREEYKQVVDELEQMKKERADEAKELIYLRWTNACLRHDLKRPHEQQQDQDKIHSELEFGRNDVVIHYDSEHELHSDPSFDEHRGGHDHSDSGSSKRTKLLERLKRWVEGSEKARVRHSVSKGTEENVVPRRKSCSSA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0483 423 Coils Coil 234 275 - -
Vra3g0483 423 PANTHER CHUP1-LIKE PROTEIN 1 423 - -
Vra3g0483 423 MobiDBLite consensus disorder prediction 45 80 - -
Vra3g0483 423 MobiDBLite consensus disorder prediction 397 423 - -
Vra3g0483 423 MobiDBLite consensus disorder prediction 359 384 - -
Vra3g0483 423 Coils Coil 171 205 - -
Vra3g0483 423 Coils Coil 99 119 - -
Vra3g0483 423 MobiDBLite consensus disorder prediction 54 73 - -
Vra3g0483 423 Coils Coil 287 310 - -
Vra3g0483 423 MobiDBLite consensus disorder prediction 397 414 - -
Vra3g0483 423 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 423 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0483 Vra-Chr3 5507061 5509082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0483 - - gmx:100805210 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0483 3 5507061 5509082 Vra3g0483 3 5507061 5509082 ECH