Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0481 ATGGGGAGGAGTAGCGGAAGAGACCGAAGACGAAGAAGATCCGATGAGTCGGAATCCGAGTCACCGTCCGATTCCGACTCGGACCGACGCCATCGTAGCAGTAGCCGCAGGTCTAGGCGTGACTCAGACGGAGATAGGAAGAAGAAGAAGAAATCCTCGATGAACATTACAGAAGAGGAAATCGCGCAGTACATGACCAAAAGGGCCCAATCGAAGGCTATGAAAGTGGCAAAAAAGTTGAAAACCAGTACGGTGTCAGGCTATTCCAACGATTCGAATCCGTTCGGTGACTCCAATCTCAATGAGAAGTTTGTTTGGCGCAAGAAGATTGAACGCGACGTTTCTCAAGGTGTGTCTATTGATACGTTTTCTGTTAAGGCCGAGAAAAAAAGACAGATAGAAAGGATGGCAGAAATTGAAAAAGTGAAAAAGAGAAGAGAGGAAAGGGCACTCGAGAAAGCTCGGCACGAGGAAGAAATGGCACTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTTCAGGACTGGGAAAAAAAAGAAGAAGAGTTCCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGACCAATTGATGTCCTAACCAAGCATCTCAACGGCTCTGATGATTTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACTGTAAACGAAATGAACGAGCTACGTGATGACATCAAAATGCATCTGGACCTTGACAGGGCAACACCAACTCATGTAGAATATTGGGAGGCACTCCTTCTGGTGTGTGATTGGGAGCTAGCAGAAGTGCGAAAAAAGGATGCGTTTGACCGAGCTAGAGTGCGAGGAGAAGAACCTCCTGCTGAGCTGCTTGCAGAAGAAAGGGGATTGCATTCCAGTGTTGAGCCAGATGTAAAGAGGCTTTTGCAAGGAAAGACACGTGCAGAATTGGAGGCTTTACAAGTTCACATTGAATCAGAAATGCGTTCTGGTACAGCAAAGGTGGTTGAATACTGGGAGGCCATTTTAAAACATCTCCACATTTATAAAGCCAAGGCTTGTTTGAAGGAAATTCATGCTAAATTGCTACGTAAGCATTTGCAATCTCTCGAGAGACCATTGGAGGATGAAGATAAATTGGAGGATGCTAATGTTATGATACCTGACGAGGAGGAAGATACAGAGGATGATATTAAAGTCCGATCTCTAGATGAATCATTTTCACCAGAACCCATTAGAGGGGAACAAGAAGATGAAGACGAGGCTGGATCATTTTCGCCACAACTGTTGCATGGTGATGAAAGTGAGGAAGCTATTGACCCTGAAGAGGATAGAGCCATGCTGGAGCGGAACCGCAAGGCTGTCTTAGAAGAACAGCAAAGACGAGTTCAGGAAGCAATGATATCAAAGCCAGCTCCTTCTGAAGATAATTTTGAGATGAAGGCTTTAAAAGCTATGGGGGATATGGAAGATGGAGATGCGGTGTTTGGATCTGGTGCTGAAGTGAGCCTGGATTCCCAGGTTTATTGGTGGCATGACAAATACAGGCCTAGGAAGCCGAAGTATTTCAACCGTGTTCACACTGGATACGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGATACAAATTTAATATTTTCTATCCTGATCTTGTAGACAAGACAAAAGCCCCAACTTACACCATTGAGAAGGATGGCAGCAATGGGGAGACTTGCATTATAAGATTCCATGCTGGGCCACCGTACGAAGACATAGCTTTCCGCATCGTAAACAAAGAATGGGAATATTCTCACAAGAAGGGTTTTAAGTGCACATTTGAACGTGGAATTCTGCACGTGTACTTTAATTTCAAACGCCACCGCTACCGCAGATAA 1917 0.445 MGRSSGRDRRRRRSDESESESPSDSDSDRRHRSSSRRSRRDSDGDRKKKKKSSMNITEEEIAQYMTKRAQSKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDTFSVKAEKKRQIERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVNEMNELRDDIKMHLDLDRATPTHVEYWEALLLVCDWELAEVRKKDAFDRARVRGEEPPAELLAEERGLHSSVEPDVKRLLQGKTRAELEALQVHIESEMRSGTAKVVEYWEAILKHLHIYKAKACLKEIHAKLLRKHLQSLERPLEDEDKLEDANVMIPDEEEDTEDDIKVRSLDESFSPEPIRGEQEDEDEAGSFSPQLLHGDESEEAIDPEEDRAMLERNRKAVLEEQQRRVQEAMISKPAPSEDNFEMKALKAMGDMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0481 638 MobiDBLite consensus disorder prediction 1 56 - -
Vra3g0481 638 MobiDBLite consensus disorder prediction 377 443 - -
Vra3g0481 638 Pfam Cactus-binding C-terminus of cactin protein 514 638 IPR019134 GO:0005515
Vra3g0481 638 Pfam Conserved mid region of cactin 165 362 IPR018816 -
Vra3g0481 638 SMART CactinC_cactus_3 514 638 - -
Vra3g0481 638 MobiDBLite consensus disorder prediction 385 401 - -
Vra3g0481 638 MobiDBLite consensus disorder prediction 402 416 - -
Vra3g0481 638 MobiDBLite consensus disorder prediction 1 71 - -
Vra3g0481 638 PANTHER BNAC05G02180D PROTEIN 4 638 - -
Vra3g0481 638 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 4 638 - -
Vra3g0481 638 Coils Coil 137 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0481 Vra-Chr3 5487238 5494544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0481 K25058 - gmx:100780087 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0481 3 5487238 5494544 Vra3g0481 3 5487238 5494544 ECH