Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0477 ATGGGATTTCCAAGAGCTTTGATGATCATTATTACCTCACTGCTGGTGGGTTGCTCCTCAGCTTTGGATGAATCAGCAGTGATTTACGTGGGTGGAAAAGTGATGTGCCAGGACTGCACCCAGGGCTGGAACGAATGGGTTAATGGTGACAGACCTATGAAAGGAGTTAAGGTGTCCCTAACATGCATGGACAAGAGAAGCAGGGTTGTGTACTATACAAGTGACACAACAGATGAGTTAGGGCAATACGGCTTGAGTGTGAAAAAGTATGTCTATGGCAAGGAATTGGATACAAAACGATGCTCCGTGAGGTTGGTGTCTTCTCCAGATAACGTTTGCAACATCCCCACTGACTTCGGTGGTGGAAAGTCTGGTGTCAAGCTCAACAATCCTACATCAATGTATCGCAGTTTCATCAAATACATGCTCAACCATTTTTATTACACCACTCCTATGTGCGATAAACCAGACACTGAGGTCTCTGACTCTGAACCTCAAGATCACCACGGTCCAGGAGGCTACTACTAA 528 0.4564 MGFPRALMIIITSLLVGCSSALDESAVIYVGGKVMCQDCTQGWNEWVNGDRPMKGVKVSLTCMDKRSRVVYYTSDTTDELGQYGLSVKKYVYGKELDTKRCSVRLVSSPDNVCNIPTDFGGGKSGVKLNNPTSMYRSFIKYMLNHFYYTTPMCDKPDTEVSDSEPQDHHGPGGYY* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0477 175 PANTHER OS01G0164075 PROTEIN 6 160 - -
Vra3g0477 175 PANTHER POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN 6 160 - -
Vra3g0477 175 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vra3g0477 175 Pfam Pollen protein Ole e 1 like 30 125 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0477 - - gmx:100527270 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0477 3 5466057 5467340 Vra3g0477 3 5466057 5467340 ECH