Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0476 ATGTTCAGATTCTGGGGATCACAAGAGCAACAATCACAGGATGGTTCCTCGCAGTCACAGTCGTGGTATCCACCATCAGTGGTAAGTTCACCAAGTTCGTCTAGGCCTGCTACACCGTCGGGATCTTCTTCTTCATTACCGCAAAGGCCTTCTTCTCATGTTCCACCCTCCGAAGCCGCTGGAATCATTGCTGTTTTGAAGGACAAGAGTGTTGATGAGTTGCGGAAGCTTTTATCTGACAAAGATGCATACCAGCAGTTTTTACATTCGCTTGATCAGGTCAAGATTCAAACTAATCTGAAAGATGAACTTTGCAAGGAGAATTTGCAGCTTGCAGAGGAAAATCTTCAAAAGGAGCCTCGTATCATGGAACTTAGGAATCAATGTAGAATAATTCGGACAACTGAGTTAGCTGCCGCTAAAGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGAAATGTTGAAACTGAATTCACCATCGTCTCTTGTCCAGAGGATTCAAGAGTCTGCGAATAAGACTGAAGAGGAATCTGACAATCTACACCAGCATTTCCTTGACGGAGAGATCGATCTTGGGGGTTTCTTGCAAAAGTACAAGAAGCTACGTACCACTTACCACAAAAAGACTCTCATACATCTTGCTGCTAAAACATCAACTGTATGA 666 0.4309 MFRFWGSQEQQSQDGSSQSQSWYPPSVVSSPSSSRPATPSGSSSSLPQRPSSHVPPSEAAGIIAVLKDKSVDELRKLLSDKDAYQQFLHSLDQVKIQTNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEEMLKLNSPSSLVQRIQESANKTEEESDNLHQHFLDGEIDLGGFLQKYKKLRTTYHKKTLIHLAAKTSTV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0476 221 MobiDBLite consensus disorder prediction 1 57 - -
Vra3g0476 221 Coils Coil 164 184 - -
Vra3g0476 221 MobiDBLite consensus disorder prediction 1 52 - -
Vra3g0476 221 Pfam Modifier of rudimentary (Mod(r)) protein 67 211 IPR009851 -
Vra3g0476 221 SUPERFAMILY Endosomal sorting complex assembly domain 159 209 IPR037202 -
Vra3g0476 221 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 221 - -
Vra3g0476 221 Coils Coil 130 157 - -
Vra3g0476 221 ProSiteProfiles VPS37 C-terminal domain profile. 141 221 IPR009851 -
Vra3g0476 221 Gene3D Helix hairpin bin 145 214 IPR029012 -
Vra3g0476 221 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 221 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0476 K12185 - gmx:100305851 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0476 3 5461936 5465940 Vra3g0476 3 5461936 5465940 ECH