Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0471 ATGGCTTTGCCACTGAAGCAGCCTCATTTTGTGTTGGTTCCACTTCTGGCTCAAGGGCACATGATCCCAATGGTTGACATAGCAAGAATTTTGGCAGAGAGAGGTGTTATCATCACATTGATAAGTACCCCTAACAATGCCTCAAGAATGGGGCAAACCGTTGTTAGAGCAGCAAAATCTGGCCTTCCAATTCAGCTCCTACAAGTTCCATTTCCATGCCAGAAAGTAGGACTTCCATTGGGCTGCGAAAATCTTGATGCTTTACCATCAAAAAACCTTCTCAGAAACTTCTATATTGGCCTTGACATGATGCAAGAACCTGTGGAGGAGTACCTTCAAAACCACCCTTCTCCTCCAAGTTGCATTATATCAGATAAATGCCTTTCTTGGACTTCTGTAACAGCCAAGAAGTTCAACATTCCAAGGCTTGTCTTTCATGGGATGTCGTGTTTTTCATTACTTAGCTCCTATAATATCAAGCTCTACAATTCTCATCTTTCTTGCTCTTCTGATGCAGAACCTTTTCTCATTCCCGGACTGCCCCAGAGGATTGAGATAACCAAAGCTCAGCTCCCCGGAGCCTTTTTTTCTCTGCCTGATTTGGATGATTTTAGACACAAAATGTTGGAGGCCGAAATGTCTGCTTCTGGGGTTGTGGTAAATAGCTTTGAAGAATTGGAACATGGTTGTGTAAAGGAGTATGAGAAGGCCTTGAACAAGAGAGTTTGGTGCATTGGTCCTGTGTCTTTATCCAACAAGGATAGTTTGGACAAGTTTGAGAGAGGAAACAAGCCTTCAATTGAAGAGAAGCAATGCTTGGAATGGCTAAACTCAAAGGAGCCAAGATCAGTTGTTTATGCATGCCTTGGCAGCTTGTGTAGGCTTGTTACATCTCAATTGATAGAAATTGCTTTGGGTTTAGAAGCATCAAGTCAACCATTTATATGGGTGGTAAAAACTGCTGGAGAAAATATTACAGAGGTAAATAATTGGTTAGAGAATGAAAAATTTGATGAAAGGGTAAGAGGAAGAGGACTTGTCATAAAGGGATGGGCTCCACAGACATTGATATTGTCTCACCCTTCGGTTGGTGCATTCTTGACCCACTGTGGCTGGAATTCAACCATAGAAGGCGTGTCATCTGGGTTGCCCATGATAACATGGCCTTTATTTGCGGAGCAATTCTTGAATGAAAAATTTATCGTGCAAGTTTTGAAAATTGGAGTTAGAATGGGTGTGGAGGTTCCGGTGAGGTGGGGTGATGAAGAGAAAGTTGGTGCAATGGTGAAGAAAACTAGAATCACTGAAGCTATAGAGATGTGCATGGCGGGCGGTGGAGACGGGGAAAACAGGAGGAATAGAGCAATAGAGCTTGGAAAGATGGCAAGAAATGCCATGGCGGAGGAAGGTTCTTCTCACTTCAACCTTTCATGCTTAATTGAAGACATTGTCAACATTAGTGTTAATTAA 1470 0.4252 MALPLKQPHFVLVPLLAQGHMIPMVDIARILAERGVIITLISTPNNASRMGQTVVRAAKSGLPIQLLQVPFPCQKVGLPLGCENLDALPSKNLLRNFYIGLDMMQEPVEEYLQNHPSPPSCIISDKCLSWTSVTAKKFNIPRLVFHGMSCFSLLSSYNIKLYNSHLSCSSDAEPFLIPGLPQRIEITKAQLPGAFFSLPDLDDFRHKMLEAEMSASGVVVNSFEELEHGCVKEYEKALNKRVWCIGPVSLSNKDSLDKFERGNKPSIEEKQCLEWLNSKEPRSVVYACLGSLCRLVTSQLIEIALGLEASSQPFIWVVKTAGENITEVNNWLENEKFDERVRGRGLVIKGWAPQTLILSHPSVGAFLTHCGWNSTIEGVSSGLPMITWPLFAEQFLNEKFIVQVLKIGVRMGVEVPVRWGDEEKVGAMVKKTRITEAIEMCMAGGGDGENRRNRAIELGKMARNAMAEEGSSHFNLSCLIEDIVNISVN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0471 489 PANTHER PHOSPHATIDYLCHOLINE:DIACYLGLYCEROL CHOLINEPHOSPHOTRANSFERASE 1-RELATED 2 487 - -
Vra3g0471 489 CDD GT1_Gtf-like 8 467 IPR002213 GO:0008194
Vra3g0471 489 Gene3D Glycogen Phosphorylase B; 274 467 - -
Vra3g0471 489 Gene3D Glycogen Phosphorylase B; 5 273 - -
Vra3g0471 489 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Vra3g0471 489 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 485 - -
Vra3g0471 489 PANTHER GLYCOSYLTRANSFERASE 2 487 - -
Vra3g0471 489 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 270 402 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0471 Vra-Chr3 5417731 5419239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0471 9 487 Glycosyltransferase AT2G36780 50.417 2.17e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0471 - - ccaj:109818058 768.074