Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0470 ATGGCATCCCAAGAATCTCAGTTTCACTTCGTTCTGTTTCCTCTCATGTCCCCAGGCCACTTGCTCCCAATGACAGACCTTGCAACAATATTGGCACAGAATAACGCGATTGTTACTGTAGTCACCACCGTACATAACGCTTCTCGTTTATCAGAAACCTTTTCCCGTGCTTCCGACTCAGGCCTCAACCTCCGATTGGTTCAACTCGAATTTCCATCCCATGATGCTGGATTTCCAGAAGGGTGTGAGAATTTTGACATGCTGCCTTCTATGGGCATGGGTTTGAATTTCTTCCTTGCCGCAAACACCATTCTACACGAACCGGCTGAGAAAGTGTTTGAACAGTTGACACCGAAACCAAACTGCATAATCTCTGACGTGGGTTTAACATACACAGCCGACATCGCCACCAAATTCAACGTCCCCAGAATATCTTTCTACGGCGTTAGTGGTTTCTGTCTCTGGTGGCAGCAAAAGCTGGTCACTTCTAAGGTTTTTGATACCATAGCCACAGATTCAGAGTACTTTTCCATACCTGACATCCCTGACAAAGTTGAGATCACAAAAGCACAGACGGCAAGACCTATGCACGAAAACTGGAGCGAGTTTGTTGGAAAAATGGCCGCAGCAGAAGCGGTTACTTATGGGGTGGTCGTGAATTCTTTTGAGGAGTTGGAACAAGCATATGCAGGGGATTTCAAGAAGGCCAGAAACAATAAAGTGTGGTTTGTTGGGCCCGTTTCACTTAGAAACAGGAATGATTTGGATAAGGCTCAGAGAGGGAACAGCAACAACACATCAAGTGATGCTCATAGTTGCATGATGTGGCTTGACTTACAAAAACCAAATTCAGTCATTTACGTGTGCCTTGGGAGCATATGCAATTTAACTCCGTCGCAGTTGATAGAGCTTGGTATGGCCTTAGAAGCATCCAAAATACCGTTCATTTGGGTCATCAGGGAAAGGAATCAAACAGAAGAGTTGATGAAGTGGATTAAGGAATCAGGGTTTGAGGAAAGGACCAAGGGGGTAGGTCTAATGCTTCTGGGTTGGTCTCCTCAGGTACTAATACTATCACACCCTGCAATTGGAGGGTTCATGACACACTGCGGTTGGAACTCAACCCTAGAAGCAATATCCGCTGGCGTGCCAATGCTTACGTGGCCATTGTTTGGGGACCAATTCTTCAATGAGAGGTTTGTTGTGAACATTATAAGAATTGGTGTACGCGTTGGGGTGGAAACTCCGGTGCTCTGGGGTGATGAAGAGAAAACTGGGGTATTGGTGAAGAAGGAAGATGTAGTGAGGGCTATAGAGAAGTTAATGGATGAGGGAAGTGAAAGTGAAGAGAGAAGAAAAAGGGTCAGAGAGCTTGCAGAGATGGCTAAGACAGCTGTAGAAGGAGGCTCCTCTCACTTCAATGTCACCCAGCTAATCCAAGACATCATGCAACACTCCCACAAAAACTAA 1470 0.4578 MASQESQFHFVLFPLMSPGHLLPMTDLATILAQNNAIVTVVTTVHNASRLSETFSRASDSGLNLRLVQLEFPSHDAGFPEGCENFDMLPSMGMGLNFFLAANTILHEPAEKVFEQLTPKPNCIISDVGLTYTADIATKFNVPRISFYGVSGFCLWWQQKLVTSKVFDTIATDSEYFSIPDIPDKVEITKAQTARPMHENWSEFVGKMAAAEAVTYGVVVNSFEELEQAYAGDFKKARNNKVWFVGPVSLRNRNDLDKAQRGNSNNTSSDAHSCMMWLDLQKPNSVIYVCLGSICNLTPSQLIELGMALEASKIPFIWVIRERNQTEELMKWIKESGFEERTKGVGLMLLGWSPQVLILSHPAIGGFMTHCGWNSTLEAISAGVPMLTWPLFGDQFFNERFVVNIIRIGVRVGVETPVLWGDEEKTGVLVKKEDVVRAIEKLMDEGSESEERRKRVRELAEMAKTAVEGGSSHFNVTQLIQDIMQHSHKN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0470 489 PANTHER GLYCOSYLTRANSFERASE 3 489 - -
Vra3g0470 489 CDD GT1_Gtf-like 9 465 IPR002213 GO:0008194
Vra3g0470 489 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 486 - -
Vra3g0470 489 Coils Coil 438 458 - -
Vra3g0470 489 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Vra3g0470 489 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 401 IPR002213 GO:0008194
Vra3g0470 489 Gene3D Glycogen Phosphorylase B; 5 272 - -
Vra3g0470 489 PANTHER GLYCOSYLTRANSFERASE 3 489 - -
Vra3g0470 489 Gene3D Glycogen Phosphorylase B; 273 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0470 Vra-Chr3 5409932 5415061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0470 3 489 Glycosyltransferase AT2G36800 51.423 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0470 K13496 K22771 gmx:112997714 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0470 3 5409932 5415061 Vra3g0470 3 5409932 5415061 ECH