Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0469 ATGGATTCAACATCCCTCTGCAACCTCCACTTTGTGTTCATACCGTTAATGGCCCCAGGTCATCTTCTTCCCATGGTGGACATGGCCAAAATGTTGGCAAGACGCAAAGTGAAAGTGAGCATAGTCACCACACCCCTCAATTCCATCCACTTCCAAGATAGCATAGACAGAGAGATTCAATCTGGCTCACCCATCCAGATTCTTCATGTTCCGTTTCCATGGGCTGAGGCTGGAATACCAGAGGGGTGTGAGAGCCAAGACACTCTTCCTTCAATGGATCTCCTATACAACTTCAATGTCGCTCTTAACTTGTTGCAGCGCCCAATAGAAGAGCTTCTACAAAACCAAAGCCCGTTTCCAAGCTGCATAATTGCCGACACAAATCTCTTGTGCGCCGCTGGTGTTGCTGACAAGTTAAATATTCCTAGAATAGTATTCGACGGGACTAGTTGTTTCTATCTGCTTTGCTGTCACAGTTTAAACAAGAACAAGGTCCATGAAGCTGCATCTTATGATGAGAAATTTCTTGTGCCTGGAATGCCCCACAAGATCGAATTGCGAAGATCTCAACTCCCCGGGATATTCTACCCAGGCAGGGACTTGAGGTTGCAAGCTTTCCGTGAGGCAATAAGGGAAGCTGCGAAAAAAGCATATGGGATAGTGGTAAATAGTTTCGAAGAGTTGGAAGCAGAGTATGTGAAAGAGTACGAAAGGGTTACGGGGCATAAGGTATGGTGTGTAGGACCTGTGTCGCTGTGCAATAAGGATGACAGGGAGAAGGGTCTGAGAAGTAAGAGAAACTCGAGTGATGAGAGTAGATATGTGAAGTGGCTTGATTCATGGCCTGCAAGGTCTGTGATTTATGTGTGTCTTGGTAGTCAAAACCGTGCAACGCCTGAGCAGTTAATAGAAGTGGGGTTGGGATTGGAAGCGACAAAAAGGCCATTCATTTGGGTTCTTAGAGGTGCATATAGAAGAGAGGAAACAGAGAAATGGCTGTTGGAAGATGGGTTTGAAGAAAGGGTGAAAGGGAGAGGGATTCTGATAAAGGGTTGGGTGCCACAAGTGTTGATATTATCACATAGAGCAATAGGAGCGTTTTTGACACATTGTGGATGGAATTCGACGCTTGAAGGGATCTGTGCAGGGGTTCCGTTGGTGACTTATCCTCTGTATGCCGAGCAGTTTCTTAATGAGAAGGTTGTTGTGCAGGTGGTGGAGACTGGAGTGAGTGCAGGAGCTGAAACTGTTGTGCGCTTGGGAGATGAATTCAAAGCTCGAGTAGAGGTGACCAGGGACAATGTTACGGATTCAATTGAGAATGTAATGGGTGAAGGAAAAGAAAAAGAAATGATAAGGGAAAGAGCAAGAAATTATGCAGACATGGCAAGGAAAACAATAGAAGAAGGTGGTTCATCTTACAACAACATGTCTCTGCTAATCGAAGACATCATCCGTTTGAAAATGTCACAATTAAATGACACACCAAATGTTTTTTTGGAGTAA 1506 0.4482 MDSTSLCNLHFVFIPLMAPGHLLPMVDMAKMLARRKVKVSIVTTPLNSIHFQDSIDREIQSGSPIQILHVPFPWAEAGIPEGCESQDTLPSMDLLYNFNVALNLLQRPIEELLQNQSPFPSCIIADTNLLCAAGVADKLNIPRIVFDGTSCFYLLCCHSLNKNKVHEAASYDEKFLVPGMPHKIELRRSQLPGIFYPGRDLRLQAFREAIREAAKKAYGIVVNSFEELEAEYVKEYERVTGHKVWCVGPVSLCNKDDREKGLRSKRNSSDESRYVKWLDSWPARSVIYVCLGSQNRATPEQLIEVGLGLEATKRPFIWVLRGAYRREETEKWLLEDGFEERVKGRGILIKGWVPQVLILSHRAIGAFLTHCGWNSTLEGICAGVPLVTYPLYAEQFLNEKVVVQVVETGVSAGAETVVRLGDEFKARVEVTRDNVTDSIENVMGEGKEKEMIRERARNYADMARKTIEEGGSSYNNMSLLIEDIIRLKMSQLNDTPNVFLE* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0469 501 Gene3D Glycogen Phosphorylase B; 8 275 - -
Vra3g0469 501 PANTHER GLYCOSYLTRANSFERASE 7 491 - -
Vra3g0469 501 Gene3D Glycogen Phosphorylase B; 276 468 - -
Vra3g0469 501 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 247 405 IPR002213 GO:0008194
Vra3g0469 501 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 487 - -
Vra3g0469 501 ProSitePatterns UDP-glycosyltransferases signature. 352 395 IPR035595 -
Vra3g0469 501 CDD GT1_Gtf-like 9 473 IPR002213 GO:0008194
Vra3g0469 501 PANTHER GLYCOSYLTRANSFERASE 7 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0469 Vra-Chr3 5407157 5409083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0469 9 486 Glycosyltransferase AT2G36760 47.917 7.94e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0469 K13496 - gmx:100820150 781.941