Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0468 ATGGCTCCCCAAGAACAGCAACTCCACTTCGTCTTGTTTCCATTGATGGCTCAAGGCCATATGATCCCCATGATGGACATTGCAAAAATATTGGTGCGACGCAATGTTATTGTCACTGTAGTCACAACACCCAATAATGCAGCTCGTTTCACATCGATCTTTGATCGTTATGCTGAATCTGGGTTTCAAATCAGATTAGTTCAACTTCAGTTCCCATGCAAAGAAGCTGGAGTACCAGATGGATGCGAGAATCTCGATACGATACCTACACTGGGCATGGCCGCTGATTTCTTCAATGCAACGAACTTTCTTCGACAGCCAGCTGAAAAACTGTTTGAAGAGTTAACACCTGCACCAAGCTGCATCATCTCCGATATGTGCTTACCATATACAAACCACATTGCTAAAAAGTTCAAAATTCCCAGGATTTCGTTTGTGGGAGTAAGTTGCTTCTATCTCTTTAGCATGTCTAACATACGCATCCATAATGTTATGGAGAGCGTAACTACCGAATCGGAGTACTTTGTTGTGCCTGGTATACCTGACAAAATTGAAATGAACATAGCTAAGACAGGAATGGCAATGACTGAAGGCATGAGACTGGTTACTAATAATTTGTTTGAAGCTGAAATGGAAGCATATGGGATGATCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAGAGGGATACAAGAAGATAAGAAACAATAAACTGTGGTGTTTGGGACCACTATCATTTAGCAACAAGGATCACTTGGATAAGGCTCAAAGAGGTCGAATTGCCTCAATTGAGGAGTGCCAACTGAGGTGCTGGCTTGATCGTCAAAAGCCAGAAACTGTAATCTATGCATGCTTTGGAAGCCTATGTAATCTAACAGCACCACAGTTGATAGAGCTCGGTTTGGCCTTGGAAGCATCAGAAAGACCCTTCATTTGGGTTATCAGGGAACGAAGTTATTCAGAATCATTAGAATTGGAAAAGTGGATCGAGGAGAATGGATTTGAGGAAAGAACAAGTTCTAGAAGCCTTCTAATTCGGGGTTGGGCACCTCAATTATTAATACTATCACACCCTGCAATTGGAGGGTTCATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATATGTGCTGGTGTTCCAATGGCTACGTGGCCACTTTTTGGAGACCAGTTTTTGAATGAAAGTCTTGCCGTGGATGTATTAAAAGTTGGAGTTAAGGTTGGAGTGGATCGTCCTGTTACATGGGGAGAAGAAGAAAAAATTGGAGTGTTGGTGAAGAAAGAAGATGTTGAAAAGGCAATCGTAAAGTTAATGGATGAGACAACCGAAAATGAAGAAAGAAGAAAAAGGGTGAGAGAGCTTGCAGAAATGGCTAAAAGAGCTGTAGAGAAAGGAGGATCCTCTTATTCTAATGCCACCTTGCTTATCGAAGATATAGCGCAAAAGATCAAACAAAAAGTATGA 1473 0.4162 MAPQEQQLHFVLFPLMAQGHMIPMMDIAKILVRRNVIVTVVTTPNNAARFTSIFDRYAESGFQIRLVQLQFPCKEAGVPDGCENLDTIPTLGMAADFFNATNFLRQPAEKLFEELTPAPSCIISDMCLPYTNHIAKKFKIPRISFVGVSCFYLFSMSNIRIHNVMESVTTESEYFVVPGIPDKIEMNIAKTGMAMTEGMRLVTNNLFEAEMEAYGMIMNSFEELEPAYAEGYKKIRNNKLWCLGPLSFSNKDHLDKAQRGRIASIEECQLRCWLDRQKPETVIYACFGSLCNLTAPQLIELGLALEASERPFIWVIRERSYSESLELEKWIEENGFEERTSSRSLLIRGWAPQLLILSHPAIGGFITHCGWNSTLEAICAGVPMATWPLFGDQFLNESLAVDVLKVGVKVGVDRPVTWGEEEKIGVLVKKEDVEKAIVKLMDETTENEERRKRVRELAEMAKRAVEKGGSSYSNATLLIEDIAQKIKQKV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0468 490 Gene3D Glycogen Phosphorylase B; 1 269 - -
Vra3g0468 490 PANTHER GLYCOSYLTRANSFERASE 7 485 - -
Vra3g0468 490 CDD GT1_Gtf-like 8 482 IPR002213 GO:0008194
Vra3g0468 490 Gene3D Glycogen Phosphorylase B; 270 466 - -
Vra3g0468 490 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Vra3g0468 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 483 - -
Vra3g0468 490 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 485 - -
Vra3g0468 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 397 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0468 Vra-Chr3 5399579 5401104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0468 8 489 Glycosyltransferase AT2G36760 53.196 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0468 K13496 K22771 gmx:100781486 801.971