Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0466 ATGTCTTCCCAAGAACAAGGGCCACACTTTGTCCTGTTTCCATTGATGGCCCAAGGCCACATGATCCCCATGATGGACATCGCCAAACTATTGGTTCACCACGCTGTGACTGTGACTGTAGTCACCACTCCGCGTAACGCAGCTCGTTTCACACCAATCTTTGATCGTTATGTTGGGTCTGGACTTCCTATTAGATTAGCTCAACTTCCATTCCCATGTGAAGAAGTTGGACTGCCAGAAGGATGCGAGAATATCGATATGATACCTTCACTTGGCACGGCCAGGACTTTCTTCGAAGCAACAAACCTTCTGCATCAACCGGCGGAAAAACTCTTTGGAGAGTTTTCGCCACCACCAAGCTGCATAATATCTGATATGTGTTTGCCATATACATCCCATATCGCCAAAAAATTCAATATCCCAAGGATTTCCTTTGTTGGGGTAAGTTGCTTTTGTCTTCTGTGTCATCATACTATACTCGTCAATAATGTCAGGGAGAACATAGCATCGGACTCGGAGTACTTTGTGTTGCCTGGTATCCCTGACAAGATTGAGATGACCATGGAACAAAGTGGAGTAACGTTGAATGAAACATGGGAACAGTTCCGTGAAGATATTATGGGTGCTGAAATGGCTACTTATGGGGTAATCATGAATTCTTTTGAAGAGTTGGAGCCAGAATATGCAAGGGAATACAAGAAGGTGAAAGATGATAAAGTATGGTGCATAGGACCTGTGTCTCTTATTAACAAGGATCACTTGGATAAGGCTCAAAGAGGTAGGGCTTCAGTTGATGAGTCAGAACATATGAAATGGCTTGATTGTCAGAAGGCAGGGAGTGTAATCTATGCATGTCTTGGAAGCCTGTGCAATTTAACAGCACCGCAGTTGATAGAGCTTGGTTTGGCCTTGGAAGCATCAGAAAGACCCTTCATTTGGGTTATCAGGGAAGGAAAACATTCAGAACCATTGGAAAAGTGGATTGAGGAAAACGGATTTGAGGAAAGGACAAGTTCAAGAAGCCTTGTGATTCGAGGCTGGTCTCCGCAATTGTTAATATTATCACACCCTGCTATTGGAGGGTTCATAACTCACTGTGGGTGGAACTCTATCTTAGAAGCCATATGTGCTGGTGTTCCAATGATTACGTGGCCACTGTTTGCGGATCAGTTCTTGAATGAAAGTCTGGTGGTGAAGGTTCTGAAAGTTGGAGTGAAGGTTGGGGTGGAAACTCCGATGATATGGGGCAAGGAAGAGGAAGTTGGTGTGGAAGTGAAGAAAGAAGAGATTGAAAGGGCAATAGCAGAGATAATGAATGAGACAAGTGAAAGTGAAGAAAGAAGAGAAAGGGTTAGAGAATTAGGTGAGATGGCTCAAAGAGCGGTGGAGAAAGGGGGGTCCTCTCATTCTAACGTCTCTTTTCTTATCCAGAATATCATGCAAAAAAACAACGGAGTTACGCCATAG 1467 0.4397 MSSQEQGPHFVLFPLMAQGHMIPMMDIAKLLVHHAVTVTVVTTPRNAARFTPIFDRYVGSGLPIRLAQLPFPCEEVGLPEGCENIDMIPSLGTARTFFEATNLLHQPAEKLFGEFSPPPSCIISDMCLPYTSHIAKKFNIPRISFVGVSCFCLLCHHTILVNNVRENIASDSEYFVLPGIPDKIEMTMEQSGVTLNETWEQFREDIMGAEMATYGVIMNSFEELEPEYAREYKKVKDDKVWCIGPVSLINKDHLDKAQRGRASVDESEHMKWLDCQKAGSVIYACLGSLCNLTAPQLIELGLALEASERPFIWVIREGKHSEPLEKWIEENGFEERTSSRSLVIRGWSPQLLILSHPAIGGFITHCGWNSILEAICAGVPMITWPLFADQFLNESLVVKVLKVGVKVGVETPMIWGKEEEVGVEVKKEEIERAIAEIMNETSESEERRERVRELGEMAQRAVEKGGSSHSNVSFLIQNIMQKNNGVTP* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0466 488 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 8 484 - -
Vra3g0466 488 Coils Coil 423 454 - -
Vra3g0466 488 Gene3D Glycogen Phosphorylase B; 5 270 - -
Vra3g0466 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
Vra3g0466 488 CDD GT1_Gtf-like 8 465 IPR002213 GO:0008194
Vra3g0466 488 PANTHER GLYCOSYLTRANSFERASE 8 484 - -
Vra3g0466 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 278 399 IPR002213 GO:0008194
Vra3g0466 488 Gene3D Glycogen Phosphorylase B; 271 463 - -
Vra3g0466 488 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0466 Vra-Chr3 5385602 5387393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0466 9 482 Glycosyltransferase AT2G36760 56.904 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0466 K13496 K22771 gmx:100777426 740.339