Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0465 ATGGTTCTCCAAACAAGCAATCCTCACTTTGTATTATTCCCCATGATGGCTCAAGGTCACATGATCCCCATGATGGACATTGCAAGAATATTGGCACAGCGTGGTGTGATTGTCACCGTATTCACAACCCCAAAAAATGCATCACGTTTCAATTCTGTCATATCTCGAGCTGTTTCATCAGGCCTCAAAATCCGTTTAGTACAGCTAAATTTTCCATCAAAAGAAGCAGGGCTACCCGAAGGGTGTGAGAATTTGGACATGGTCTCATCCAATGATATGTCCAAAATTTTTCAAGTCATCCACATGCTCCAAAAGCCATCAGAGGAGTTCTTTCAGACACTTACCCCTAAACCAAGTTGCATAATCTCTGACTTCTGCATCGCTTGGACCCTTCAATTAGCTGAAAAGTATCACATTCCAAGGATTTCTTTTCACGGGTTTTCTTGTTTTTGCCTCCACTGCCGGTACGTGATCCATACTTCAGATTTTTGTAGAAGCATCACCTCAGAATCCAAATACTTCACTATTCCCGGCATACCCGACAAGATTCAAGTGACCAAAGAGCAGTTACCAGGATCACTTGCCAATGATTTGAATGACTTTAAAGACCAGGTGCGTGATGCTGAAAAGAAGTCTTATGGGGTTATCGTAAATACTTTTGAAGAGTTGGAGAAGGCGTATGTGAGGGATTTCAAGAAGGTTAAAAATAATAAGGCGTGGTTCATTGGTCCAGTTTCATTATGTAACAATGATGGTTTGGACAAAGCTCAAAGAGGTAAGCAGGCCTCAATTGATGAGAACCATTGCTTGAAGTGGCTAGATGTTCAGCAACCAAAGTCTGTGGTCTATGTTTGTTTTGGAAGCATATGCAACTTGATTCCTTCACAGCTTGTGGAGTTGGCCTTGGCCTTGGAAGATACAAAAAGGNCATTCGTATGGGTTATTAGGGAGGGACGGCAGTTGCAAGAACTGGAAAAGTGGTTCTCTGAAGAAGGGTTTGAGGAAAGAACAAAAGGGAGAGGCCTTATAATTCGAGGTTGGGCACCACAAGTAATGTTATTATCACACTCTTCCATTGGTGGATTCTTAACACACTGCGGTTGGAATTCAACACTTGAAGGGATAATTGCTGGAGTGCCACTTGTTACATGGCCTCTGTTTGGTGATCAATTTTTAAACGAGAAGCTTGTTACTGATGTGTTGAAGATTGGAGTGAGCGTTGGGGCAGAGGTTCCATTGAAGTGGGGAGATGAAGAGAAGAGAGGTGTGATGGTGAAGAAGGAAGATATTAAGAGGGCAATATGCATGGTGATGGATGAAGATGGAGAAGAAAGGAAAGAGAGAAGAGAAAGGGTATGGAAATTGAGCGAAATGGGAAAGAGAGCTGTTGAAGAAGGAGGTTCTTCTCATCTTGATGTCACTTTACTTATCCAAGACATTGTGCAACAAACAAATACCACAGAGGATGCAAATTTGACACTCGTATGA 1488 0.422 MVLQTSNPHFVLFPMMAQGHMIPMMDIARILAQRGVIVTVFTTPKNASRFNSVISRAVSSGLKIRLVQLNFPSKEAGLPEGCENLDMVSSNDMSKIFQVIHMLQKPSEEFFQTLTPKPSCIISDFCIAWTLQLAEKYHIPRISFHGFSCFCLHCRYVIHTSDFCRSITSESKYFTIPGIPDKIQVTKEQLPGSLANDLNDFKDQVRDAEKKSYGVIVNTFEELEKAYVRDFKKVKNNKAWFIGPVSLCNNDGLDKAQRGKQASIDENHCLKWLDVQQPKSVVYVCFGSICNLIPSQLVELALALEDTKRXFVWVIREGRQLQELEKWFSEEGFEERTKGRGLIIRGWAPQVMLLSHSSIGGFLTHCGWNSTLEGIIAGVPLVTWPLFGDQFLNEKLVTDVLKIGVSVGAEVPLKWGDEEKRGVMVKKEDIKRAICMVMDEDGEERKERRERVWKLSEMGKRAVEEGGSSHLDVTLLIQDIVQQTNTTEDANLTLV* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0465 495 Gene3D Glycogen Phosphorylase B; 2 271 - -
Vra3g0465 495 PANTHER GLYCOSYLTRANSFERASE 4 491 - -
Vra3g0465 495 Gene3D Glycogen Phosphorylase B; 272 464 - -
Vra3g0465 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
Vra3g0465 495 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 399 IPR002213 GO:0008194
Vra3g0465 495 CDD GT1_Gtf-like 8 464 IPR002213 GO:0008194
Vra3g0465 495 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Vra3g0465 495 PANTHER GLYCOSYLTRANSFERASE 4 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0465 Vra-Chr3 5381140 5382968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0465 9 482 Glycosyltransferase AT2G36750 55.975 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0465 K13496 K22771 gmx:100802029 810.061