Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0464 ATGTACCTATCGAATCATTGTATTGTGATTTGTATGTACTTTATCATTTCACCCGAAAAGATGCCTTCGCAAGAACAAAAGCTACACTTTGTCCTGTTTCCATTGATGGCCCAAGGCCACATGATCCCTATGATGGACATCGCCAAAATATTGGTGCAACGCAATGTTATTGTGACAGTAGTCACAACGCCACACAATGCAACTCGTTTCATCTCAATCTTTGATCGTTATATTGAGTCTGGCTTTCCCATTAGATTAGTTCAAGTTCAATTCCCATGTGAAGAAGCAGGACTACCAGATGGGTGTGAGAATCTCGATATGATACCTTCACTAGACACAGCCACAGGTTTCTTCCAAGCAACAAGCCTTCTGCAACAACCGGTGGAAAAACTATTTCAAGAGTTAACACCAGCACCGAGCTGCATCATATCTGATATGTGTTTACCATATACATCCCACATCGCAAAAAAATTCAATACTCCAAGGATTTCTTTTGTCGGAGTCAGTTGCTTTTTTCTTCTGTGTAAGCATAATATAATGATCTATAATGCCCTGGAGAGTATAACATCTGAGTCCGATTCCTTTGTTGTGCCTGGTATCGCTGACAAAATTGAAATCACCAAAGCCCAGTCTGCACAGCCGATGAATGAAAGCTGGAAATATTTTAGTAGTGAAATTAATGTTGCTGAAATGGATTCTTATGGGGTAATCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAAGGGAATACAAGAAGGTGAAAGATGATAAAGTGTGGTGCATAGGACCTGTGTCTCTTATTAACAAGGATCACTTGGATAAGGCTCAAAGAGGTAGGGCTTCAGTTGATGAGTCTGAACATATGAAATGGCTAGATTGTCAGAAGGCAGGGAGTGTGATCTATGCATGCCTTGGAAGCCTGTGCAATTTAACAGCACCGCAGTTGATAGAGCTTGGTTTGGCCTTGGAAGCATCAGAAAGACCCTTCATTTGGGTTATCAGGGAAGGAAAACATTCAGAATCATTGGAAAAGTGGATTGAGGAAAACGGATTTGAGGAAAGGACAAGTTGTAGAAGCCTTCTGATTCGAGGCTGGTCTCCTCAATTGTTAATATTATCACACCCTGCAATTGGAGGGTTCATAACACACTGTGGGTGGAACTCTACCTTAGAAGCCATATGTGCTGGTGTTCCAATGATTACGTGGCCACTGTTTGCGGATCAGTTCTTGAATGAAAGTTTTGTGGTGCATGTTCTAAAAGTTGGAGTGAAGGTTGGGGTGGAAATTCAGATGACATGGGGCAAGGAAGAGGAAATTGGCGTGGCAGTAAAAAAGGAAGATGTTGAAAAGGCAATAATGGAGATAATGGATGTGACAAGTGAAAGTGAAGGAAGAAGAAAAAGGGTCAGAGAATTGAGTGAGATGGCTGAAAGAGCCGTGGAGAAAGGGGGATCCTCTCACTCTAATGTCACCTTGCTCATCCAGGATATCATGCAAAAGATCCAGATATAG 1518 0.4177 MYLSNHCIVICMYFIISPEKMPSQEQKLHFVLFPLMAQGHMIPMMDIAKILVQRNVIVTVVTTPHNATRFISIFDRYIESGFPIRLVQVQFPCEEAGLPDGCENLDMIPSLDTATGFFQATSLLQQPVEKLFQELTPAPSCIISDMCLPYTSHIAKKFNTPRISFVGVSCFFLLCKHNIMIYNALESITSESDSFVVPGIADKIEITKAQSAQPMNESWKYFSSEINVAEMDSYGVIMNSFEELEPAYAREYKKVKDDKVWCIGPVSLINKDHLDKAQRGRASVDESEHMKWLDCQKAGSVIYACLGSLCNLTAPQLIELGLALEASERPFIWVIREGKHSESLEKWIEENGFEERTSCRSLLIRGWSPQLLILSHPAIGGFITHCGWNSTLEAICAGVPMITWPLFADQFLNESFVVHVLKVGVKVGVEIQMTWGKEEEIGVAVKKEDVEKAIMEIMDVTSESEGRRKRVRELSEMAERAVEKGGSSHSNVTLLIQDIMQKIQI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0464 505 CDD GT1_Gtf-like 28 481 IPR002213 GO:0008194
Vra3g0464 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 28 501 - -
Vra3g0464 505 Gene3D Glycogen Phosphorylase B; 291 483 - -
Vra3g0464 505 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 27 502 - -
Vra3g0464 505 ProSitePatterns UDP-glycosyltransferases signature. 367 410 IPR035595 -
Vra3g0464 505 Gene3D Glycogen Phosphorylase B; 25 290 - -
Vra3g0464 505 PANTHER GLYCOSYLTRANSFERASE 27 502 - -
Vra3g0464 505 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 298 421 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0464 Vra-Chr3 5370415 5372044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0464 28 501 Glycosyltransferase AT2G36750 57.917 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0464 K13496 K22771 gmx:100777426 801.971