Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0463 ATGGTGTTCCTAACACCCAATCTTCACTTCGTCTTGTTTCCCCTAATGGCTCAAGGCCACATGATCCCAATGATGGATATTGCAAGAATATTGGCACACCGCGGTGTAGTTGTTACCATCTTCACCACACCAAAAAACGCATCACGTTTCAATTCCGTCCTTTCTCGTGCTGTTTCATCTGGTCTCCAAATCCGACTTCTACAACTCCATTTTCCAGCAAAAGAGGCAGGACTACCTGAAGGCTGTGAGAATTTCGACATGATAAGACCTGCGGATATGATGAACAAAATGTTCCATGCCATCAGCATGCTTCAGAAGTCAGCAGAGGAATTGTTTGAAACGCTAACACCAAAACCAAGTTGCATAATCTCTGACTTCTGCATTCCTTGGACCGCTCAACTAGCTGAAAAGTATCACATTCCAAGGATTTCGTTCCACGGATTTTCTTGCTTCGCCCTCCATTGTTTGCTGCAGCTACACATTTCAGGGGTTTGTGAAAGCATCACTTCAGAATCCGAGTATTTCACTATTCCTGGCATACCTGACCAAATTCAAGTTACCAAAGAGCAAGTACCTTTGACAACCACAACATCAAATGATGAAAAAAGATTTATGGAGCAGATAGGCTATGCTGATATGAAGTCGTATGGGGCAATCATAAATACTTTTGAAGAGTTGGAGAAAGCATATGTGAGGGATTACAAGAAGGCGAGAAACGATAAGCTTTGGTGCTTTGGTCCAGTTTCATTATGTAACAAAGATAGTTTGGATAAGGCTGAAAGAGGCAAGCAGGCCTCAATTAATGAGAGTCATTGCTTGAAATGGCTAGATTTGCAGCAACCCAAGTCTGTGGTGTATGTTTGTTTTGGAAGCTTATGCAACTTGATTCCTTCACAGCTTGTGGAGTTGGCCTTGGCCTTGGAAGACACTAAAAGGCCATTTGTATGGGTTATTAGGGAGGGAAGTCAGTTCCAAGAACTAGAAAAGTGGATCTCTGAAGAAGGGTTTGAGGAAAGGATGAAAGGAAGAGGTCTTATAATTGGAGGTTGGGCACCACAAGTAATAATATTATCACACCCTTCCATTGGAGGATTCTTAACGCACTGCGGTTGGAATTCAACACTTGAAGCGATAAGTGCTGGAGTGCCACTTGTTACATGGCCTCTATTTGCTGATCAGTTTTTAAATGGGAAGCTTGTTACTGATGTGTTGAAGATTGGGGTGAGCGTTGGGGTAGAAGTTCCATTGAAGTGGGGAGAGGAAGAGAAGACAGGTGTGATGGTGAAGAAGGATGATATTAAGAGGGCAATATGCATGGTGATGGATGAAGATGGAGAAGAAAGCAAAGAGAGAAGAGAAAGGGTATGCAAACTAAGTGACATGGGAAACAGAGCTGTTGAAGAAGGAGGCTCTTCTCATCTTGATGTCACTTTACTTATCCAAGACATTATGCAACAATCAACTACCAAAGTGGATGCATATTTGACGCACGCCTGA 1497 0.4275 MVFLTPNLHFVLFPLMAQGHMIPMMDIARILAHRGVVVTIFTTPKNASRFNSVLSRAVSSGLQIRLLQLHFPAKEAGLPEGCENFDMIRPADMMNKMFHAISMLQKSAEELFETLTPKPSCIISDFCIPWTAQLAEKYHIPRISFHGFSCFALHCLLQLHISGVCESITSESEYFTIPGIPDQIQVTKEQVPLTTTTSNDEKRFMEQIGYADMKSYGAIINTFEELEKAYVRDYKKARNDKLWCFGPVSLCNKDSLDKAERGKQASINESHCLKWLDLQQPKSVVYVCFGSLCNLIPSQLVELALALEDTKRPFVWVIREGSQFQELEKWISEEGFEERMKGRGLIIGGWAPQVIILSHPSIGGFLTHCGWNSTLEAISAGVPLVTWPLFADQFLNGKLVTDVLKIGVSVGVEVPLKWGEEEKTGVMVKKDDIKRAICMVMDEDGEESKERRERVCKLSDMGNRAVEEGGSSHLDVTLLIQDIMQQSTTKVDAYLTHA* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0463 498 Gene3D Glycogen Phosphorylase B; 275 467 - -
Vra3g0463 498 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 485 - -
Vra3g0463 498 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 401 IPR002213 GO:0008194
Vra3g0463 498 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Vra3g0463 498 Gene3D Glycogen Phosphorylase B; 5 274 - -
Vra3g0463 498 CDD GT1_Gtf-like 8 475 IPR002213 GO:0008194
Vra3g0463 498 PANTHER GLYCOSYLTRANSFERASE 6 493 - -
Vra3g0463 498 PANTHER GLYCOSYLTRANSFERASE 6 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0463 Vra-Chr3 5365868 5367626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0463 6 490 Glycosyltransferase AT2G36760 56.237 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0463 K13496 K22771 gmx:100778817 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0463 3 5365868 5367626 Vra3g0463 3 5365868 5367626 ECH