Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0461 ATGTTGTTCTGGCCTTCGCGATTCTCGCACCTTCCAATCCCATGGCTTCTTCAACCTCGATTCCCGCATCCGGTTCTTCTTTCCTTGCTCGCCGATGACTCTTCCTCCGTCAGAGAGGCCTCCATGTCCTCTCTCAAGAACATTGCCGCACTGAATCCTCTTCTCGTTCTTGATTGCTGTGCCGTCGTGTCGCGTGGTGGACGTCGGCGGTTCGGGAACATGGCTGGAGTTTTCCAAGTGATGGCGTTCGGCGTTCGGTCTCTTGACACAAGAGACGTCGATTCTGCTTTCATGGCGAAGCTAGCTAAGATTGCTACAGCTGAGCTGATATCCTCTAAGGAACTAAATTCTGACTGGCAACGAGCAGCAACAAGCCTACTTGTTGCAATAGGCTCACATTTACCTGATCTCATGATGGAAGAAATTTTTCTTCATTTATCTGGGACAAATTCAGCAGTACAGGCTATGGTTCAAATCCTTGCAGAATTTGCTTCTACTGATCCCATGCAGTTCATTCCACGTTGGAAAGGTGTACTTTCCCGAATTTTGCCAATTCTTGGAAATGTACGAGAAATGCATCGCCCCATTTTTGCAAACGCATTTAAGTGTTGGTGTCAAGCATCTTGGCAATATAGTATAGACTTTCCTTCACATTTTCCTCAAGATGCTGATGTCATGTCATTTCTAAATTCAGCTTTTGAGCTTTTGTTGAGAGTTTGGGCAGCTTCAAGAGACCTTAAGGTTCGTGTGGCAGCTGTAGAAGCACTGGGGCAGATGGTAGGTCTCATAACACGAGCACAGTTAAAGACTGCCCTACCAAGGCTTATCCCTACAATATTGGACTTGTATAAAAGAGATCAAGATATAGCTTTTTTGGCTACATGCAGTCTCCACAATCTGCTAAATGCCTCTTTGTTGTCCGAAAGTGGTCCTCCTATGCTTGATTTTGAGGATTTGACTATTGTTTTATCAACACTTCTACCTGTGATATCTACGAATAATGATGGCAAAGACCAATCAGATTTCTCTGTGGGACTAAAGATGTATAATGAGGTTCAGCATTGCTTTCTGACGGTTGGCTTGGTGTATCCAGATGATTTGTTTTTGTTCCTTGTAAATAAATGCAGATTGAGGGAAGAACCATTGACTTTTGGTGCCCTTTGCATTTTGAAGCATCTTTTGCCAAGGCTGTCTGAAGCTTGGCATAGTAAAATATCTCTACTAGTCGAAGCTGTAAAGTCCTTGCTTGAGGAGCAGAATTTAGCTGTTCGAAAGGCACTATCTGAGTTAATTGTGGTTATGGCTTCTCACTGTTACTTGATTGGTTCGTCTGGAGAGTTGTTCATTGAATATCTTGTACGCCATTGTGCTATAACTGATCACAATAGGAGTGATCTTGAGAACATACCAAACAAGAGAATAGAGATGAAAATTGGAGCAGTTACTCCTAGTGAGTTAAGAGCAGTTTGTGAAAAAGGTCTGCTTTTGGTAACTATTACGATTCCTGAAATGGAGCATATTCTTTGGCCTTTTCTGTTGAGGATGATTATTCCACGAACCTACACTGGTGCTGTGGCCACGGTGTGCAGGTGTATCTCAGAATTGTGGCGGCATAGGTCATATAGCAACGATATGTTGAGTGAGTGTAAAACCCGTCCTGATATACCAATTGCTGAGGAACTTCTTGCTCGCTTGGTGGTGCTTTTGCATAATCCTCTGGCAAGGGAACAATTGGCCACTCAAATTTTGACAGTTCTATGTCTTTTGGCACCTCTATTCCCAAAAAATATTAATTTGTTTTGGCAGGATGAGATTCCAAAGATGAAGGCATATGTTAGTGATACAGAAGACTTAAAGCAGGATCCATCATATCAAGACACTTGGGATGACATGATTATCAATTTTCTTGCAGAATCTTTGGATGTGATTCAAGATGCAGATTGGGTTATGTCTCTTGGAAATGTTTTTGCCAAACATTATGAACTTTATGCTTCTGATGATCAACACACTGCGCTTCTGCACCGGTGCCTAGGCATTCTGCTTCAAAAGGTTAACGAAAGAGCTTATGTCCGTGATAAAATAGATTGGATGTACAAGCAGGCAAACATTGCAATTCCAACAAACAGACTTGGATTGGCAAAAGCAATGGGATTGGTTGCTGCATCACACTTGGATACAGTGTTGGACAAGCTGAAGGACATTTTAGACAATGTTGGGCAAGGCATATTTCAGAGGTTTATGCCTGATTTGATCCTGTCATTATTTTCAGATAGTTTCAGAACGGAAGAGTCTGATGACATTCATGCTGCTTTGGCACTAATGTATGGATATGCTGCAAAGTATGCCCCATCAACAGTTATTGAAGCCAGAATAAATGCCCTTGTTGGCACCAATGTGCTCTCACGACTTCTTCATGTGCGTCATCCCAAAGCAAAGCAAGCGGTCATCACAGCAATTGATTTACTAGGTAATGCTGTTATTAATGCTGCTGAAAGTGGCTCACCATTTCCACTGAAAAGAAGGGACCAACTGCTTGATTATATTTTAACTTTAATGGGTCGGGATGATGAAGATGGTTTTGCTGATTACAATGACCTATTGCGTACTCAGGCCCTTGCTATAAGTGCCTGCACCACTTTGGTCTCTGTGGAACCAAAGCTAACAGTTGAAACTAGGAACCATGTAATGAAGGCTACATTGGGGTTCTTTGCTATACCAAATGATCCAGTTGATGTTGTCAATCCCCTTATAGACAACTTGATTACCCTTTTATGTGCAATTCTTCTCTCTGGGGGAGAAGATGGAAGAAGTCGAGCAGAACTACTAATGCTTATCTTGAGGCAAATTGATCAATTTGTCTGTTCGCCCATTGAGTATCAGAGGAAAAGAGGCTGCCTTGCTGTACATGAGATGCTTCTAAAGTTTCGCATGATTTGTGTTAGTGGGTATTGTGCACTGGGCTGCCATGGGAGTTGTGCACATAACAAGCAAATCGACAGGACTCTGTTTAGGAATTTTTCTAAACTGCCATCTGTATTTGTACTGCCAAGTCGAGAAGCTCTGTGCTTGGGAGATAGGGTTATAATGTACCTTCCACGATGTGCAGACCCAAATTCTGAAGTCCGAAAAGTATCTGCACAAATTATTGATTTACTCTTTAGCATCTCTCTTTCACTTCCAAGACCTGCGGGTTCATCTATATCTGCTGAGGTTATAGAATTGTCATACAGTGCATTATCTTCTCTTGAGGATGTTATAGCCATATTGAGGAATGATACTTCTATTGATCCATCAGAAGTTTTCAACAGGATTGTTTCCTCCCTCTGCATTTTGTTGACAAAAGAGGAGATGGTGGCTACACTGCATGGTTGCTCAGTTGCTATATGTGATAAGATCAAGCAGTCAGCTGAAGGGGCTATTCAAGCTGTTGTTGAATTTGTTACAAAGAGAGGGGGGGAATTGACTGAAATTGATATCTCAAGGACAACCCAATCATTGATCTCTGCTGTTGTGCATGCAACTGACAAGCATTTGCGTGTGGAAACTCTTGGAGCTATTTCTTCTTTGGCTGAAAATACTAGCTCAAAAACTGTTTTTGATGAAGTCCTGGCTACTGCTGGAAGGGATACGATCACAAAGGATATATCTAGGTTACGTGGAGGATGGCCCATGCAGGATGCATTCTATGCATTTTCTCAGCACATGGTACTGTCAGTTTTGTTTCTAGAACATGTGATATCTGTCCTTAGCCAGATTCCGATTCTAAAAGCTGATGTGGACAGAGTTGAGGATAGTCCCGTTGACAGTCATACAGAAGATGGCAAACTACAAGCTGCAATTTTTGCTCTTACTGCTTTCTTCAGAGGTGGGGGAAAAGTTGGAAAAAGGGCCGTTGAACAAAACTATGCTTCTGTTCTTTCTGAGCTTACACTGCAACTTGGAAGCTGTCATGGTTTAACCTATTCTGGTCAGCATGAACCGTTGAGGAATCTTCTTACTGCATTTCAGGCATTCTGTGAATGTGTTGGTGACCTTGAGATGGGCAAGATTTTAGCTAGAGATGGTGAACTATCAGAAAATGAAAGGTGGATTAGTCTCATTGGAGACATTGCAGGCTGCATATCTATAAAGCGACCAAAAGAGGTACAAAATATTTGTCTATTTTTGAAAAACTCATTGCATCGACCCCAGAAATATCAGAGGGAAGCTGCAGCAGCTGCACTATCAGAATTTGTTCGTTATAGTGGTGGACTTGGTTCACTTTTGGAGCAAATGGTTGAGGTTCTATGTCGACATGTATCAGATGAGTCTTCAACTGTTCGACGATTATGTTTGCGAGGACTAGTGCAGATCCCTCTGATTCATATTCTGAAGTATACAACTCAAGTCTTGGGGGTTATATTAGCTCTACTAGATGATTCTGATGAATCTGTGCAATTAACTGCTGTATCATGCTTACTAATGATTCTTGATTCTTCACCTGATGATGCAGTTGAGCCCATTTTGCTTAGTCTTTCAATAAGGCTTCGAAATCTTCAAGCAAGCATGAACGCAAAGATGCGAGCCACTTCTTTTGCAGTATTTGGGGCCCTAAGCAAATATGGAACTGGGGCACTAAGTGAGGCATTTGTTGAGCAGGTGCATGCTGCTGTTCCTCGCCTGGTCTTGCATCTTCATGATGAAGATGTTAGTGTCCGATCAGCCTGTCGGAATACCATGAAACAAGTTTGCCCATTGATGGAAATTGAACGATTGCATGCTGTACTAAACACACACAGTTTCCTTTCTGATCATCGAAGTGACTATGAGGACTTTCTCCGAGATATTGCAAAGCAATTTACTCAACATCTTCCCATCAGAGTCGATAGTTATATGGCTTCATCAGTGCAGGCTTTTGACGCACCATGGCCCATAATTCAGGCAAATGCTATATACTTCTGCTGCAGCATGCTCTCTCTATCGGACAATCAGCATATTTTATCTGTTTATCATTCACAGGTCTTTGGTATGCTGGTTGGGAAAATGAGTCGATCACCTGATTCTGTCGTTAGAGCAACGTGTTCTGCCGCTCTGGGCTTGTTGCTGAAATCATCCAATTTATGTTCATGGGTGGACTCAACATCACGGAACAATGATGCAGAGTCCGTGAAGAACTAA 5157 0.4221 MLFWPSRFSHLPIPWLLQPRFPHPVLLSLLADDSSSVREASMSSLKNIAALNPLLVLDCCAVVSRGGRRRFGNMAGVFQVMAFGVRSLDTRDVDSAFMAKLAKIATAELISSKELNSDWQRAATSLLVAIGSHLPDLMMEEIFLHLSGTNSAVQAMVQILAEFASTDPMQFIPRWKGVLSRILPILGNVREMHRPIFANAFKCWCQASWQYSIDFPSHFPQDADVMSFLNSAFELLLRVWAASRDLKVRVAAVEALGQMVGLITRAQLKTALPRLIPTILDLYKRDQDIAFLATCSLHNLLNASLLSESGPPMLDFEDLTIVLSTLLPVISTNNDGKDQSDFSVGLKMYNEVQHCFLTVGLVYPDDLFLFLVNKCRLREEPLTFGALCILKHLLPRLSEAWHSKISLLVEAVKSLLEEQNLAVRKALSELIVVMASHCYLIGSSGELFIEYLVRHCAITDHNRSDLENIPNKRIEMKIGAVTPSELRAVCEKGLLLVTITIPEMEHILWPFLLRMIIPRTYTGAVATVCRCISELWRHRSYSNDMLSECKTRPDIPIAEELLARLVVLLHNPLAREQLATQILTVLCLLAPLFPKNINLFWQDEIPKMKAYVSDTEDLKQDPSYQDTWDDMIINFLAESLDVIQDADWVMSLGNVFAKHYELYASDDQHTALLHRCLGILLQKVNERAYVRDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDTVLDKLKDILDNVGQGIFQRFMPDLILSLFSDSFRTEESDDIHAALALMYGYAAKYAPSTVIEARINALVGTNVLSRLLHVRHPKAKQAVITAIDLLGNAVINAAESGSPFPLKRRDQLLDYILTLMGRDDEDGFADYNDLLRTQALAISACTTLVSVEPKLTVETRNHVMKATLGFFAIPNDPVDVVNPLIDNLITLLCAILLSGGEDGRSRAELLMLILRQIDQFVCSPIEYQRKRGCLAVHEMLLKFRMICVSGYCALGCHGSCAHNKQIDRTLFRNFSKLPSVFVLPSREALCLGDRVIMYLPRCADPNSEVRKVSAQIIDLLFSISLSLPRPAGSSISAEVIELSYSALSSLEDVIAILRNDTSIDPSEVFNRIVSSLCILLTKEEMVATLHGCSVAICDKIKQSAEGAIQAVVEFVTKRGGELTEIDISRTTQSLISAVVHATDKHLRVETLGAISSLAENTSSKTVFDEVLATAGRDTITKDISRLRGGWPMQDAFYAFSQHMVLSVLFLEHVISVLSQIPILKADVDRVEDSPVDSHTEDGKLQAAIFALTAFFRGGGKVGKRAVEQNYASVLSELTLQLGSCHGLTYSGQHEPLRNLLTAFQAFCECVGDLEMGKILARDGELSENERWISLIGDIAGCISIKRPKEVQNICLFLKNSLHRPQKYQREAAAAALSEFVRYSGGLGSLLEQMVEVLCRHVSDESSTVRRLCLRGLVQIPLIHILKYTTQVLGVILALLDDSDESVQLTAVSCLLMILDSSPDDAVEPILLSLSIRLRNLQASMNAKMRATSFAVFGALSKYGTGALSEAFVEQVHAAVPRLVLHLHDEDVSVRSACRNTMKQVCPLMEIERLHAVLNTHSFLSDHRSDYEDFLRDIAKQFTQHLPIRVDSYMASSVQAFDAPWPIIQANAIYFCCSMLSLSDNQHILSVYHSQVFGMLVGKMSRSPDSVVRATCSAALGLLLKSSNLCSWVDSTSRNNDAESVKN* 1719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0461 1718 PANTHER MAESTRO HEAT-LIKE REPEAT FAMILY MEMBER 1 52 1696 - -
Vra3g0461 1718 SUPERFAMILY ARM repeat 24 740 IPR016024 -
Vra3g0461 1718 SUPERFAMILY ARM repeat 1034 1700 IPR016024 -
Vra3g0461 1718 Gene3D - 221 441 IPR011989 -
Vra3g0461 1718 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 52 1696 IPR045206 -
Vra3g0461 1718 Gene3D - 1389 1700 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0461 K24816 - gmx:100800961 3086.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0461 3 5302389 5350021 Vra3g0461 3 5302389 5350021 ECH