Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0422 ATGGCGGAGCCTCAGTCGTCGCTAGAGAAGCAATTCGACTCGTTTAGGGTTCAGCTGGAACAATCTGGAACGCTCCGCGACCGAATTCGAAGCGTCGTTTCGGAGATTGAGTCTTCCACTAGGCTCATCTATGCCACTCTTCTTCTCGTTCATCAGTCTCGCCCCCACACCCGGTATCATGGTGATTGGAAGAGTGAAACACAGACTGTAGTTTCGATGCTTACGTTCATGTACTGGCTAGAAACAGGAAGCCTTCTCGAGCACAAAGAGGCTGAGGAAAAACTTATGTTGGGTTCAGACTTTGGTCTAGACGTTGAAGACTAG 324 0.4938 MAEPQSSLEKQFDSFRVQLEQSGTLRDRIRSVVSEIESSTRLIYATLLLVHQSRPHTRYHGDWKSETQTVVSMLTFMYWLETGSLLEHKEAEEKLMLGSDFGLDVED* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0422 107 Gene3D Translin; domain 1 56 100 IPR016068 GO:0043565
Vra3g0422 107 SUPERFAMILY Translin 7 98 IPR036081 GO:0043565
Vra3g0422 107 Pfam Translin family 26 97 IPR002848 GO:0043565
Vra3g0422 107 Gene3D Translin; domain 1 2 55 IPR016068 GO:0043565
Vra3g0422 107 PANTHER TRANSLIN 58 107 IPR033956 GO:0003697|GO:0003723|GO:0016070
Vra3g0422 107 PANTHER TRANSLIN 5 57 IPR033956 GO:0003697|GO:0003723|GO:0016070
Vra3g0422 107 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 58 107 IPR002848 GO:0043565
Vra3g0422 107 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 5 57 IPR002848 GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0422 Vra-Chr3 4921322 4922604 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0422 - - vra:106757351 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0422 3 4921322 4922604 Vra3g0422 3 4921322 4922604 ECH