LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra3g0419	ATGGCGTCCGAAGGCATTCTTCTCGGCATGGGAAACCCTCTCCTCGACATCTCCGCCATCGTTGATCCTGAGTTCTTGAAAAAGTACTCTCTCACCTTGAACAATGCCATTCTTGCGCATGACAAGCACAAACCCATATATGAAGAGTTGGTTGAGAAATATGACGTGGAGTACATTGCTGGAGGTTCTACTCAGAATTCAATCAAGGTTGCTCAGTGGATGCTCCAAGTTCCTGGTGCAACAAGTTTCATGGGTGGCATTGGAAAGGATAAGTTTGGCGAAGAGATGAAGAAGAGCACAAAGCTTGCTGGTGTAAAAGTTCACTATCACGAAGATGAATCCACACCTACTGGAACTTGTGCTGTTTGTATAATTGGTGGCGAAAGGTCGCTTGTTGCAAACTTAGCAGCTGCAAATTGCTACAGGTCTGGGCATTTGAAGAAACCAGAAAATTGGGCACTAGTTGAAAAGGCTAAATATATTTATATTGCTGGCTTTTTCCTCACTGTATCACCAGATTCTATCCTGTTAGTTGCTGAGCATGCTGCTGCAAATAACAAGATCTTCTCGATGAACCTTTCTGCCCCTTTCATTTGTGAGATATTCAGGGAGAGACTGGAGAAAGCTCTACCGTATACAGATTTTGTTTTTGGAAATGAGACTGAAGCAAAAATATTTTCTAAAATTCAAGGCTGGGAGACTGAAAATGTCGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCAGGAACGCACAAAAGGATAACAGTTATCACACAGGGTGCGGATCCTGTATGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCCGTGGAACTTTTGCCTAAAGAGAAACTAGTTGACACAAACGGAGCAGGAGATGCATTTGTTGGAGGATTTCTTTCACAATTGGTTCAGGAGAAGCCCATAGAAGAATGTGTGAGAGGTGGCTGTTATGCAGCAAACGTCATCATCCAAAGATCTGGCTGCACTTACCCAGAGAAGCCTAATTTCCATTGA	1026	0.4357	MASEGILLGMGNPLLDISAIVDPEFLKKYSLTLNNAILAHDKHKPIYEELVEKYDVEYIAGGSTQNSIKVAQWMLQVPGATSFMGGIGKDKFGEEMKKSTKLAGVKVHYHEDESTPTGTCAVCIIGGERSLVANLAAANCYRSGHLKKPENWALVEKAKYIYIAGFFLTVSPDSILLVAEHAAANNKIFSMNLSAPFICEIFRERLEKALPYTDFVFGNETEAKIFSKIQGWETENVEEIALKISQWPKASGTHKRITVITQGADPVCVAEDGKVKKFPVELLPKEKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRGGCYAANVIIQRSGCTYPEKPNFH*	342

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra3g0419	341	SUPERFAMILY	Ribokinase-like	8	334	IPR029056	-
	Vra3g0419	341	PRINTS	Adenosine kinase signature	66	75	IPR001805	GO:0004001\|GO:0006166
	Vra3g0419	341	PRINTS	Adenosine kinase signature	83	97	IPR001805	GO:0004001\|GO:0006166
	Vra3g0419	341	PRINTS	Adenosine kinase signature	114	129	IPR001805	GO:0004001\|GO:0006166
	Vra3g0419	341	PRINTS	Adenosine kinase signature	152	178	IPR001805	GO:0004001\|GO:0006166
	Vra3g0419	341	PRINTS	Adenosine kinase signature	261	280	IPR001805	GO:0004001\|GO:0006166
	Vra3g0419	341	Gene3D	-	8	327	IPR029056	-
	Vra3g0419	341	PANTHER	-	1	340	IPR001805	GO:0004001\|GO:0006166
	Vra3g0419	341	Pfam	pfkB family carbohydrate kinase	28	335	IPR011611	-
	Vra3g0419	341	ProSitePatterns	pfkB family of carbohydrate kinases signature 2.	290	303	IPR002173	GO:0016773
	Vra3g0419	341	CDD	adenosine_kinase	4	335	-	-
	Vra3g0419	341	PANTHER	ADENOSINE KINASE 2-LIKE ISOFORM X1	1	340	-	-
	Vra3g0419	341	Gene3D	-	15	134	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra3g0419	Vra-Chr3	4901636	4905467	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra3g0419	K00856		-	gmx:100810561	628.632

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra3g0419	3	4901636	4905467	Vra8g0849	8	17931585	17935870	PCT