Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0396 ATGGCTGATAATGAGAAGCAGCCCAATAACCAGGAGGCAAGTCCTCTTCTGCACCAGCCCAAATCCCAATCAACTACGCCACCCGATACTCCCGAGTTTCTCCTCGGATGGACCGCAGATGGGCTTCCGTTGGGCCATGGCAGCGTCGTTGGCCAGCCCATGGGCCGAGCCCCCTGGAATTCCTCTATCTGCGCTTGTCTCGGCCAGAACGATCACTTTTGCAGCAGCGATCTCGAAGTTTGTCTTCTTGGGAGTGTGGCTCCTTGTGTGCTGTATGGAAGCAATGTTGAGAGACTTGGATCAGCTCCCGGGACGTTTGCTAATCACTGCTTGCCTTATTCTGGACTGTACGTAATTGGGAATTCCTGCTTTGGTTGGAATTGCCTTGCACCGTGGTTTTCCTACCCTAGTCGAACTGCTATTCGTCGGAGGTTCAATTTAGAGGGAACTTGCGAAGCACTTAATAGGTCATGTGGGTGCTGTGGAAGCATTTTAGAAGATGAGTTACAACGTGAACAATGTGAGTCAGCATGTGACTTGGCAACTCATGTCTTCTGTCATGTGTGTGCTCTTTGTCAAGAGGGTCGTGAGCTCCGTCGTAGGTTACCTCATCCTGGCTTTAATGCTCAACCGGTTCTGGTTATGATTCCCCCGGGCGAGCAGACCATGGGACGTGAAACTTGA 684 0.5146 MADNEKQPNNQEASPLLHQPKSQSTTPPDTPEFLLGWTADGLPLGHGSVVGQPMGRAPWNSSICACLGQNDHFCSSDLEVCLLGSVAPCVLYGSNVERLGSAPGTFANHCLPYSGLYVIGNSCFGWNCLAPWFSYPSRTAIRRRFNLEGTCEALNRSCGCCGSILEDELQREQCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQTMGRET* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0396 227 MobiDBLite consensus disorder prediction 1 32 - -
Vra3g0396 227 Pfam PLAC8 family 59 197 IPR006461 -
Vra3g0396 227 PANTHER CELL NUMBER REGULATOR 8 24 218 - -
Vra3g0396 227 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 74 199 IPR006461 -
Vra3g0396 227 MobiDBLite consensus disorder prediction 1 31 - -
Vra3g0396 227 PANTHER DUF614 FAMILY PROTEIN-RELATED 24 218 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0396 Vra-Chr3 4625561 4628490 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0396 - - gmx:100801509 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0396 3 4625561 4628490 Vra3g0396 3 4625561 4628490 ECH