Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0363 ATGGCCATGGCCGAAATGCGAACGGCATTCTCGCTGCTCATCTTCTTCTTCCTTCTCTCCCCCTCCACGGCGGAGATAAAGTCCCTCACCATAAGCTCCGACACCCGCCCCATGATCCTGTTCGAGAAATTCGGGTTTACTCACAAAGGCCATGTGTCCATTGCAGTGTCCTCTGTCTCCGTGGGCGTGCTCTCCTCGGCGGTGCAGCCGGAATCGTCGCGGTTGGGATTCTTCCTCCTGAACGAAGAGTCTCTCCTCCAAGTGCTGATGGAGATCCAACAGAACCCTTCCTTCTGCGTCCTCGACTCCCACTACATCCTCCTCCTCTTCACATTCCGCGACCTCTCCCCTCCCCCCTTGGCCTCCTTCAACCGCTCGTACCCGGTCACCTCCCCCAACGAGTATAGCCTCTTCTTCGCCAACTGCGCACCGGAAACCTCGGTCACCATGGTCGTCCACACCGAGGCCTACAATCTCGACTCCGACGCTTCCCGCGACTACCTCTCCGCCGGTCAGACCCAGCTCCCCTCCCTCTTCTTCCTCTTCTCCATAACCTACTTCGCCATCTTCGTCTTCTGGCTCTACATCTGCTACACCAACAGGCGCTCCGTTCACCGCATTCACATCCTCATGGCTCTCTTGCTCCTCATGAAGGCCTTGAATCTAATCTGCGCCGCCGAGGATAAGCATTACGTAAAAGTCACCGGCCTCCCTCATGGCTGGGATGTGTTGTTTTATATATTTCAGTTCATCCGCGTTGTTTTGCTCTTCACCGTCATCGTTTTGATAGGAACAGGATGGTCTTTTCTCAAGCCCTTTTTGCAGGACAGGGAGAAGAAGGTGTTAATGATTGTGATCCCGCTTCAGGTTCTGGCTAACTTGGCTTCCGTTGTGATTGGGGAAACCGGGCCTTTTATAAAAGACTGGGTTACTTGGAACCAGGTGTTTTTGCTTGTGGATATTATATGCTGTTGTGCTATTATTTTCCCCATTGTTTGGTCTATAAGGTCGCTGAGAGAGACCTCCAAAACTGATGGGAAGGCTTCGAGGAATTTGGCTAAGTTAACGCTTTTCAGACAGTTTTATATTGTTGTTATTGGCTACTTGTATTTCACCAGAATAGTGGTGTTTGCTTTGAGGACTATTGCGGCTTATAAGTTCCAATGGGTAAGCAATGCCGCGGAGGAAACTGCTAGTCTTGCGTTTTATGTTGTCATGTTCTACATGTTTAGACCTGTGGAGAAGAATGAGTACTTTGTGCTTGATGAGGAGGAGGAGGAGGCTGCGGAGATTGCTCTCAAGGATGAAGATTTTGAGCTTTGA 1323 0.5079 MAMAEMRTAFSLLIFFFLLSPSTAEIKSLTISSDTRPMILFEKFGFTHKGHVSIAVSSVSVGVLSSAVQPESSRLGFFLLNEESLLQVLMEIQQNPSFCVLDSHYILLLFTFRDLSPPPLASFNRSYPVTSPNEYSLFFANCAPETSVTMVVHTEAYNLDSDASRDYLSAGQTQLPSLFFLFSITYFAIFVFWLYICYTNRRSVHRIHILMALLLLMKALNLICAAEDKHYVKVTGLPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQDREKKVLMIVIPLQVLANLASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKASRNLAKLTLFRQFYIVVIGYLYFTRIVVFALRTIAAYKFQWVSNAAEETASLAFYVVMFYMFRPVEKNEYFVLDEEEEEAAEIALKDEDFEL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0363 440 Pfam Lung seven transmembrane receptor 135 416 IPR009637 GO:0016021
Vra3g0363 440 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 3 439 - -
Vra3g0363 440 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 3 439 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0363 Vra-Chr3 4346477 4348390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0363 K22985 - gmx:100811083 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0363 3 4346477 4348390 Vra3g0363 3 4346477 4348390 ECH
Vra3g0363 3 4346477 4348390 Vra8g0961 8 21536069 21538803 PCT