Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0357 ATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTCTTAGCATGGATGAACCCTCTTCTTCCATTTCCAACACAACTCAATTTGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACAGATCCAAGAAGAACACCCTCCAGAGACTTCATTGTCCCTAGTTCTTCTCCTAAACCTTTGCATGATCATCTCCCCAAGCCTAAGAAAAACTCCACTTCCAAGCCAAGTGTCCAGAAAAAGAAAAATCCAACAAAGGGTCTTGATCAAAAGAAGAAAAGTAGTATGGAAAAGTTGACCGAACACATCACAAACAATTACTCTTCAAAACCAATTGATAGTATTCTGAGGAGGAGTTGGGTTAGGCCGCCTACTGATTTGATCACCCCTCCTGGTTCTTCAAGATATTTGCTCGGTGACATGCCTTCCTTCCATGCTGGATCATCACTTTATGATCCTGTTTTGGCTTTAACTAACGTTGACAAGGACAAAGCTCAGGTCCTTCATCATGATGAAACCATCCATTCATCTAAACCCTCTTCTAGCTCCTCTCTTCCAAAATCTGCTCCCTCAGACCAGGTAGTAGTTTTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGAAAGGTGAGGAAACATCTCTCCAGAATGCGAGGAGTAACATCCTTCAACATAGACTTTGCGGCAAAGAAGGTAACAGTGGTTGGTGATGTGACTCCTTTGAGCGTATTGGCAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCAGAACCTGCTTCAGTAGTTGGATCCGGTTATGCAGAAACCAAGAAAACAAATTTTATCTAA 846 0.4338 MKGIDIFCASQASTAICLSMDEPSSSISNTTQFGGRAIDRHNPIITDPRRTPSRDFIVPSSSPKPLHDHLPKPKKNSTSKPSVQKKKNPTKGLDQKKKSSMEKLTEHITNNYSSKPIDSILRRSWVRPPTDLITPPGSSRYLLGDMPSFHAGSSLYDPVLALTNVDKDKAQVLHHDETIHSSKPSSSSSLPKSAPSDQVVVLRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEPASVVGSGYAETKKTNFI* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0357 281 PANTHER OS08G0405700 PROTEIN 1 277 IPR044526 -
Vra3g0357 281 MobiDBLite consensus disorder prediction 22 101 - -
Vra3g0357 281 CDD HMA 201 254 IPR006121 GO:0046872
Vra3g0357 281 MobiDBLite consensus disorder prediction 87 101 - -
Vra3g0357 281 Gene3D - 196 259 - -
Vra3g0357 281 ProSiteProfiles Heavy-metal-associated domain profile. 198 255 IPR006121 GO:0046872
Vra3g0357 281 Pfam Heavy-metal-associated domain 202 254 IPR006121 GO:0046872
Vra3g0357 281 MobiDBLite consensus disorder prediction 22 36 - -
Vra3g0357 281 SUPERFAMILY HMA, heavy metal-associated domain 198 255 IPR036163 GO:0046872
Vra3g0357 281 PANTHER COPPER CHAPERONE 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0357 Vra-Chr3 4286843 4288920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0357 - - gmx:100810015 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0357 3 4286843 4288920 Vra8g0951 8 21166018 21167805 PCT