Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0354 ATGGAAGACTCTTCTTCTGCTGCTTATATCCGTCTGGTGCACCGTTTGATAGAGGAGTGTATCTTGTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTTTCTAAACATGCAAATATCAACCCTGTTATTACTTCCACCGCAGTTTGGAAGGAGTTAGAGAAGGAGAATCAGGAGTTTTTCGAGGCATACTCTAGAAGCAGAGCAGAAAAAGCTTCGATTTCTGAGAGAGAGACGAGGCAAAGAATACAGAACATGGTTTTAGATTCTTCCAACGAACGAGTTTAA 288 0.4132 MEDSSSAAYIRLVHRLIEECILFNMNKEECMEALSKHANINPVITSTAVWKELEKENQEFFEAYSRSRAEKASISERETRQRIQNMVLDSSNERV* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0354 95 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 10 65 IPR006476 -
Vra3g0354 95 Pfam Plant protein 1589 of unknown function (A_thal_3526) 13 65 IPR006476 -
Vra3g0354 95 PANTHER - 2 92 - -
Vra3g0354 95 PANTHER OS02G0137100 PROTEIN 2 92 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0354 Vra-Chr3 4252292 4253671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0354 - - gmx:100808933 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0966 8 21585976 21587227 Vra3g0354 3 4252292 4253671 PCT