Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0346 ATGGACATGTGCTCTCATGACAATTTTGTAAATATTCTTGGAATGACTTTTAGTGAGTCACTACATATTGAAGATGCCCAGAAACCTGTACACGATCCCGAGGGTAATGATATTTGCAGTGAGAGTGACGAAAAATTGTGTGGTGCAATTAACAAGCAGGAGACAAAAGTAAACATGATGTGTTTGACAAAATCTGCAACCTTCCCAACTCCTAATACAACATTGCCTTCAAGCTCGTCTGATGAGGAGGCCAATAGATTGGTCACGGAATCGCTATCTGACCATACTGCTCATCAAACTTACTCACGCTCAATATCTCTGCCTGCTCCTCTGAAGCTCGTATCTGCCATGAAAGGTAGCCGTGAGAAACATGGGGGATCACAGGTGAAACTAAATGTGAAATGGGCGCCCGATGTGTATGATCCAATACCTACATTGTTATCACACACTGTCAGAAGCAACAAGAAGCAACAGAAATCTAGAAAGAAGAAGCCTGAAAAGAAGAATGGAAAGAAGGGTCAAAAGGGAAATTCGTCTCGAGGGGGAGGGGGCAACAGCAAAGATAAGCAGTTTCGCAAGATGAGTGCAACTTCTGGTTTGTGCTACAAGTCGATGGATTCTTGTGAGAAAGTGCTTGTAGCTTCTACTGAATTAGATGCTCTTGATTCGAACTGTGGAACTAGCTTCTTGAAAAAATCAGTTACTGAAGTGCACTACTCAGTTGCAGAAGCGCTATGA 738 0.4268 MDMCSHDNFVNILGMTFSESLHIEDAQKPVHDPEGNDICSESDEKLCGAINKQETKVNMMCLTKSATFPTPNTTLPSSSSDEEANRLVTESLSDHTAHQTYSRSISLPAPLKLVSAMKGSREKHGGSQVKLNVKWAPDVYDPIPTLLSHTVRSNKKQQKSRKKKPEKKNGKKGQKGNSSRGGGGNSKDKQFRKMSATSGLCYKSMDSCEKVLVASTELDALDSNCGTSFLKKSVTEVHYSVAEAL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0346 245 PANTHER OS05G0113500 PROTEIN 5 245 - -
Vra3g0346 245 MobiDBLite consensus disorder prediction 175 191 - -
Vra3g0346 245 MobiDBLite consensus disorder prediction 146 191 - -
Vra3g0346 245 MobiDBLite consensus disorder prediction 154 170 - -
Vra3g0346 245 PANTHER OS05G0113500 PROTEIN 5 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0346 Vra-Chr3 4126320 4129800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0346 - - gmx:100804857 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0346 3 4126320 4129800 Vra3g0346 3 4126320 4129800 ECH
Vra3g0346 3 4126320 4129800 Vra8g0983 8 22108885 22111488 PCT