Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0329 ATGGCGGAGGAGGCTCCATCTCTGATTAGTCTCTGCATGGACGCTCTGACGCAACAACTTCTCCGTCCATTCGACGATCTTCTTCTTCCTTCCACCTACCATCTTCCTTCTCACTTACTCAACACCTTCATCGCGCGCTTGCCCCCTTTCGCTCTCCGCATATTCCAACACCACCTGCCGTTCGACGAGGATGGCTTTTCCCTCGACCACTCAACCAACAAGAGGAAACGCGCGGGGTTCGTAGGGGATTGGAATCTGAATTCAGCTTGGGAGAGGTTGTTTCACCGGCGCTGGCCTCGGCGCGTTCAGCCGATTCAGCCAACGGATTGGCAGCAAATCTACTGGGAAATGCATTTGCAAGATTGTTTAGATGAAGCGGCGGAGGTAGCACTACTCCCATCGTTTAATGGGTATATTGGTGACATACAGATTTCAGACAGTACTCTTAAACATATTGGCTTTGTGGGGGACACAAGCCCTTCAACATGTGGCCATTCAAAATTGTCTTACCATTGCCGACAGTTTGGTAGCTATGCAAGTTGTCTGAGGCTGCAAAATGTTCTATGTACTGCAGAAGCTAGTGTTTTGTTGCAAGAGTGTAAGCTGCAGAGTCTGATATTAAGATGTATCAGATCCAAGGAACAGATTGATGGATTATGCAAACTTCTTGCGCAACATTCTAGAACGTTAACATCTCTGGTATTTGTTCACTGCACATTCTCCACAGACTTTATCAATGCAATATTTGGTTCTTTCGTCATAGAGGGCGTACAAAAACATGGGATCCAACATTTGTCAATCATCTCTTCAAGTTTTCTTGAACCATGTGCAGTTTCTTTACCTAGTGGACTCGTGTCATTTTTGTCTTCAGGAAGGTCCTTATGCTCATTAAAATTATCTGACAACCACCATGGACGGACTTTTGCCAAAGATCTTTTAGTGACGCTTCTCAATCTTTCCTCTAGCCTATCCGTCCTCGACCTTTCTGATAATAAAATAGCTGGATCGCTTTCTGACTTTAACAGGAGATTCTTGAGTGATTCACATCTGTGTTTTGGAAGTGGAAAGTCGTTGAAAATGCTGCGAGTACTCACTCTGAGGGAAAACAATTTAGGAAAAGAGGATGCAGAAAGTCTTAGGTATGCACTTGAGCATTTGCCTAACTTGGAGGAGCTGGATATAAGTGACAATTCAATTGAAGATGAAGGAATCAGGAATTTAATTCCCTATCTTGTTGGAGCATCTGAAACGTGTCATCCCATTAAGTGTTTGAAGTTAGATAACTGTGATTTGTCCTGCTTTGGAGTGAATCATCTTCTACATGTCCTTTCTTCTTTCAAAGGGCCATTGAAGTCTCTTTCTATTGCTGACAATTACCTTGGCAGTCAAGTAACCGAAGCATTGGGAAAATTTTTTAGTACCCCAATCGAAGTACTTGACATCGCAGGCATTGGCTTGGGTTCTGAGGGTTTTCAAGAGCTTCAAAATCTAATAAAAGAAGAGCTTAAACTGGTGAAAATTAATATAAGCAAAAACCGTGGTGGGATTGAAACTGCCAAATTTTTGTCCAAACTTTTCTCACTGGCTCCACAACTAGTTGAAGTGAATGCAGCCTGTAATCTTATGCCAATAGAATCACTGGCCATCGTCTGCTCTGCATTAAAGTTTGCAAAAGGTAATGTTCAGCACGTGGATTTGACAGGACATATATGGGACTATAAGCCAGAGCACATTTCCCTATGCACTGAATTTGTACATAATGAATTACCTATATTGATTCTTCCATCATCATCAATCTCTGCTGCACCTCACGACCATGATCCTTAG 1827 0.428 MAEEAPSLISLCMDALTQQLLRPFDDLLLPSTYHLPSHLLNTFIARLPPFALRIFQHHLPFDEDGFSLDHSTNKRKRAGFVGDWNLNSAWERLFHRRWPRRVQPIQPTDWQQIYWEMHLQDCLDEAAEVALLPSFNGYIGDIQISDSTLKHIGFVGDTSPSTCGHSKLSYHCRQFGSYASCLRLQNVLCTAEASVLLQECKLQSLILRCIRSKEQIDGLCKLLAQHSRTLTSLVFVHCTFSTDFINAIFGSFVIEGVQKHGIQHLSIISSSFLEPCAVSLPSGLVSFLSSGRSLCSLKLSDNHHGRTFAKDLLVTLLNLSSSLSVLDLSDNKIAGSLSDFNRRFLSDSHLCFGSGKSLKMLRVLTLRENNLGKEDAESLRYALEHLPNLEELDISDNSIEDEGIRNLIPYLVGASETCHPIKCLKLDNCDLSCFGVNHLLHVLSSFKGPLKSLSIADNYLGSQVTEALGKFFSTPIEVLDIAGIGLGSEGFQELQNLIKEELKLVKINISKNRGGIETAKFLSKLFSLAPQLVEVNAACNLMPIESLAIVCSALKFAKGNVQHVDLTGHIWDYKPEHISLCTEFVHNELPILILPSSSISAAPHDHDP* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0329 608 PRINTS Leucine-rich repeat signature 323 336 - -
Vra3g0329 608 PRINTS Leucine-rich repeat signature 386 399 - -
Vra3g0329 608 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 3 608 - -
Vra3g0329 608 Gene3D Ribonuclease Inhibitor 340 587 IPR032675 -
Vra3g0329 608 Gene3D Ribonuclease Inhibitor 166 339 IPR032675 -
Vra3g0329 608 SMART LRR_RI_2 386 413 - -
Vra3g0329 608 SMART LRR_RI_2 417 445 - -
Vra3g0329 608 SMART LRR_RI_2 473 500 - -
Vra3g0329 608 SMART LRR_RI_2 358 385 - -
Vra3g0329 608 ProSiteProfiles Leucine-rich repeat profile. 388 408 IPR001611 GO:0005515
Vra3g0329 608 Pfam Leucine Rich repeat 385 406 IPR001611 GO:0005515
Vra3g0329 608 SUPERFAMILY RNI-like 180 573 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0329 - - gmx:100817679 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0329 3 3911844 3926770 Vra3g0329 3 3911844 3926770 ECH