Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0318 ATGGCGGATTTAGAAAATTTGCTCTTGGAGGCAGCGGGTAGAACCCGACACTCTCGGCCAACTTCAAGAAGAGGACATGGTGATGGTGAGAATATCTCAAGTTCAGATGATGAACATGAATATTCTGGCCCAAATCTCTCTGGCTCACGAGTTCCCCTAAAGAAGAGATTTGATCTAAAGGAAAGATACGATGGCAAGGGAAGTCAGGAAGAAAAGGATGGCCAATCTGATCACAATGGTGACAGCAGCGATGAATATGATTTTGGTGATGACCTTTATAAGAATGAAGATGACAGGCGTAAGCTTTCTGAGATGACTGAACTACAGAGAGAGATGATATTATCAGATAGGGCTACCAAGAAGTATGATAAAGACTTATTGGGGAAGATATCATCAAAGCGGGAGAAGGGAAAGACAACTCTACCTGGGACACATACTTCATCTCCTCCACCATCTCGTGTGCGGTCATCAGTCCGGTCAGTTGACCGGTCAACTGCCAAGGATGGTGCTTTAAATGAATTGCGTGCGAAAAGATTAAAGCAGCAAGATTCAGAAGCAAACCGCAGACTAAATGAGGCATCTAAAAGTCCTGGACCGGGACATCTTTCACCAAAGCACAAACCTTTCTCTTCAACAAGTCTCACTAGCTCAAGTGACAGTGAAAGTGAAAATAGATCCCTGAGTGATGATGGAGGGTTGAGTCATGATGACATTATCGTTGACAGTGATAATGACAGGATAGTTTTACGATCTGAAGGGCTTTCATTTGAGGATATAAAAGAAATTACTGTTTGCAGATCAAAACTAGCAAAATGGTTTATGGAGCCCTTTTTTGAGGAGTTAATTGCTGGTTGTTTTGTAAGAGTTGGTATTGGTAGATCAAAGTCAGGACCTATCTACAGGCTTTGCTTGGTAAAAAATGTTGATGCCACCGATTGTGATCGGCAGTATAAATTAGAAAATAAAATGACACATAAGTACTTAAATCTTGTCTGGGGAAACGAAACTTCTGCTGCAAGGTGGCAAATGACTATGGTTAGCGACTCTCTTCCACTTGAGGAGGAGTTCATCCAGTGGGTTAAGGAAGTGGAACGAAGAGGCGGTCGGATGCCAACAAAGCAAGAAGTGGAAATTAAAAAGCAAGCTATACAAAATATCAACTCGTTTGTTTACTCAGCTGCTACGGTGAAGCAGATGTTACAAGAGAAAAAATCTGCCAAAATAAGACCACTGAATATTGCAGCTGAGAAGGATCGGTTAAGAACGCAATTAGAAATAGCACAGAGTAAGCAAAATAATACTGAAGTGAATAGGATCATAACAAGGTTGCAAGAATTGGAGGAAGCTCAGCAGTCTAAGGAGAAGGATGCCAGAGCTCTGAAGCTTTCTGAGATGAATAAAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAATGAATAAAGATTTGAAAGCAGGGGAGGCAGGTTATGATCCATTTTCAAGGAGATGGACTAGATCAAGAAATTACTATGCCGCAAAGCCAACTGAAGAGGCTGCAGCTGAAGATAATAGTGTCATTGATATGGTGGCTGATGAAGGCAGCTATCAGACGAGAACAGCTGTGACAGGGGTGGCTGGCATGGCTGCTACTGCTGCAGCAATAAAAGCTGCTGCCGGTGCTGGGAAGTTAGTAGATACAAGTGCTCCGGTGGATCAAGGGACAGTGTCAAATGTGCTGCACGATTTTGAGCTGCCAATATCATTATCAGTACTCCACAACTTTGGTGGAGCCCAAGGAGTTCAGGCAGGGTTTATGGCAAAAAAACAGAGAATAGAAGCAACTGTTGGACCTCAAGTTCCGGAAAAGGATGGTAAGAGCCATGCGAAGACAATATCAATTAGTGAATACAAGCGAAGAATGGGGGTTTTTTTGAATTCTGCCTAA 1938 0.4241 MADLENLLLEAAGRTRHSRPTSRRGHGDGENISSSDDEHEYSGPNLSGSRVPLKKRFDLKERYDGKGSQEEKDGQSDHNGDSSDEYDFGDDLYKNEDDRRKLSEMTELQREMILSDRATKKYDKDLLGKISSKREKGKTTLPGTHTSSPPPSRVRSSVRSVDRSTAKDGALNELRAKRLKQQDSEANRRLNEASKSPGPGHLSPKHKPFSSTSLTSSSDSESENRSLSDDGGLSHDDIIVDSDNDRIVLRSEGLSFEDIKEITVCRSKLAKWFMEPFFEELIAGCFVRVGIGRSKSGPIYRLCLVKNVDATDCDRQYKLENKMTHKYLNLVWGNETSAARWQMTMVSDSLPLEEEFIQWVKEVERRGGRMPTKQEVEIKKQAIQNINSFVYSAATVKQMLQEKKSAKIRPLNIAAEKDRLRTQLEIAQSKQNNTEVNRIITRLQELEEAQQSKEKDARALKLSEMNKKNRFENFKNASELKPMNKDLKAGEAGYDPFSRRWTRSRNYYAAKPTEEAAAEDNSVIDMVADEGSYQTRTAVTGVAGMAATAAAIKAAAGAGKLVDTSAPVDQGTVSNVLHDFELPISLSVLHNFGGAQGVQAGFMAKKQRIEATVGPQVPEKDGKSHAKTISISEYKRRMGVFLNSA* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0318 645 Coils Coil 417 463 - -
Vra3g0318 645 MobiDBLite consensus disorder prediction 22 37 - -
Vra3g0318 645 MobiDBLite consensus disorder prediction 115 140 - -
Vra3g0318 645 MobiDBLite consensus disorder prediction 115 236 - -
Vra3g0318 645 Gene3D - 254 385 IPR036128 GO:0003677
Vra3g0318 645 PANTHER PLUS-3 DOMAIN PROTEIN 1 640 - -
Vra3g0318 645 SMART rtf1 253 365 IPR004343 GO:0003677
Vra3g0318 645 MobiDBLite consensus disorder prediction 206 222 - -
Vra3g0318 645 PANTHER UNCHARACTERIZED 1 640 - -
Vra3g0318 645 MobiDBLite consensus disorder prediction 53 95 - -
Vra3g0318 645 ProSiteProfiles Plus3 domain profile. 253 388 IPR004343 GO:0003677
Vra3g0318 645 SUPERFAMILY Plus3-like 255 386 IPR036128 GO:0003677
Vra3g0318 645 Coils Coil 176 196 - -
Vra3g0318 645 MobiDBLite consensus disorder prediction 1 95 - -
Vra3g0318 645 MobiDBLite consensus disorder prediction 141 159 - -
Vra3g0318 645 MobiDBLite consensus disorder prediction 160 190 - -
Vra3g0318 645 Pfam Plus-3 domain 258 363 IPR004343 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0318 Vra-Chr3 3745831 3748991 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0318 K15178 - gmx:100817324 900.582