Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0316 ATGGACTCAAAAGGAGATGCTGAACCTCAGGAGGAGAGGCCTTCATCACCAATGAGGGTCCTGCAGCATTTTTCTGGGAGCGCATTCAAAGCTGCTGGGGAAGCATTGCATATGTCACCAATGGGGCCTGGTGGGCATAGACGTTGTCAAAGTGAGCTTGGTAGCAGAGGAGTTGAACGTAATAACAGCTTGCAGAAATTAAAATCTCACGTGAACAAGGCTTGGCGCTGGGGTGGCAAATCCCGCGAAGATGCTCTCTCGAATTTCAACCCCGAGGTCATGGCAAACCAGAAACGGCAGTGGTATCAGCTTCATCCTAAAAGTCTGGATTGTGTAAATAATAAGGAGCCGACATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGCCGTGGAGCATTCATTTGCAAGAAGGAAAAAGTGGGAAAAGGATAAGGAGAAACCTGAATTTCGAGATTGCAGAAAGTCTCAGCAGCAAAAAGTAACAGAGCCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTGCAAAGAAGCTAACAATGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTTAGTGAACTAAACGAACTTGTCTATGGACAGGAACATTTAGGAAAAGATGATCTTTCATTCGTCTTTGCAGTCAAGGCAGCAGACAATACAACACTTTATGGAGTTTGTTTACATGTGCCTGAAATTGTTCAAAGGCCCCCTGGTATCTTAGGCATATCTTCTCCTTTTTCTCATCCCTCCATGGGATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGCTATTGTCTTCTAACTAGAGTTCCCTTCTTTGAGTTACACTTTGAGATGTTAAACAGTATCATTGCACAGGAGCGCCTGAATCGGATAACAGAGTTTGTAAATGAGATGAGTCTCAGTGGCAGCGTTCCATCATCTCCCAAACTAGATGATCAAATGAGGTCAAAGGAGGAAAAATCCCCAGAGGACGAGACATTTAGTGAATGGATGGATTCTGCAATTCCTCTTGATGGTGCAGCAGCTATTGCTGCTGCAGCTGCTGGGATTATATCAGATGATGAAAGCCAACAGTTATCACCTAAAATACGGGATTATCGCTGTCAATCTCCTGTAAGTGGGAGTGCCAGTGATACTTCAGATTCGTCTCAGTTCAGGGATACAGATAAGGAGGACAAGAAGAATCTCCAAGTTCTAGATAATTGTGTGTTTAAGGCACCAGAAACTCTTGGTTCTATAAAAAGAATGCATGGAAATTGCAAAAATGACCAAGCTTCTCCGAAACATGGAACACCTTTGTCTTCTCAGACTCGTGTCTTGGAGCGTCTTGGAAGTTTTGAATCACTTTTCAGTCCAGTTAGAAGCAGGGCATCAGAAGATGAGGACGATTTTTTCTCAAACAACGAAAGAGATTATGGGGATGAATTGTTAATGGAATGGGCTATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATACCATGCTCAACCTATTCCACCTCGAGGAAGTGATTTTGTCTTCCACCCTCTTGAACATCTACAAGCTATTCAGTACATACGACATTCAGTTGCTGCTCTTGGCTTCGGAGATGATTGTTCAAACTGTTCTGAAACAGCTCTGGACAATACGAAGCTGGCAGCGGCTGAGGAAGCCCTATCATTATCAGTATGGACAATGGCAACTACTTGTCGAGTTCTATCCCTTGATAGTGTGATGACATTGATTACAGGAGTGTTGTTGGAAAAACAGGTAGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATACCCATGATTCGTCCTTTTCAGTGGCAGAGTTTATTGCTCCCAGTTTTACCTGGGACAATGATGGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGATTACTTGAATGCGAGAACTACTAATCGTGTTCTTGTTGATATACAGAGGGACAAGGTGACAATGTGTCCATTACCAAAACTTCCACAGCATAGAGAGCTTTTCTCTCAGTTGAGTCCAATTCATGCTAGACTTTCAAATCAACGATCAATTGCTAAAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCCGAAGCTGCAACTCAGTTTTTGAATATATTGTGGCACTATTTGGAGTCTCTTTGTTCAAATCTGAAATCCCACACGATAACTAATGTACAATCTAATAAAGATAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTGCTAGGGATCAACCCTTCATTAAGCTTTTTGTAGATACACAGCTCTTCACTGTTTTATCAGACTCTCGTTTGACAAGCTTTGAGAGTGGAGAGTCATAG 2442 0.4263 MDSKGDAEPQEERPSSPMRVLQHFSGSAFKAAGEALHMSPMGPGGHRRCQSELGSRGVERNNSLQKLKSHVNKAWRWGGKSREDALSNFNPEVMANQKRQWYQLHPKSLDCVNNKEPTSLFEHFVIVGLHPDANLEAVEHSFARRKKWEKDKEKPEFRDCRKSQQQKVTEPTLEPQLLFKYPPAKKLTMRMKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFAVKAADNTTLYGVCLHVPEIVQRPPGILGISSPFSHPSMGCSRFLVSAPRCYCLLTRVPFFELHFEMLNSIIAQERLNRITEFVNEMSLSGSVPSSPKLDDQMRSKEEKSPEDETFSEWMDSAIPLDGAAAIAAAAAGIISDDESQQLSPKIRDYRCQSPVSGSASDTSDSSQFRDTDKEDKKNLQVLDNCVFKAPETLGSIKRMHGNCKNDQASPKHGTPLSSQTRVLERLGSFESLFSPVRSRASEDEDDFFSNNERDYGDELLMEWAMENKNDLLQIVCRYHAQPIPPRGSDFVFHPLEHLQAIQYIRHSVAALGFGDDCSNCSETALDNTKLAAAEEALSLSVWTMATTCRVLSLDSVMTLITGVLLEKQVVIVCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGTMMDFLDAPVPYIVGIQHKPDYLNARTTNRVLVDIQRDKVTMCPLPKLPQHRELFSQLSPIHARLSNQRSIAKKHPVHRCNEVQAEAATQFLNILWHYLESLCSNLKSHTITNVQSNKDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDSRLTSFESGES* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0316 813 SMART uDENN_cls 117 254 IPR005113 -
Vra3g0316 813 MobiDBLite consensus disorder prediction 1 20 - -
Vra3g0316 813 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 42 810 - -
Vra3g0316 813 Pfam uDENN domain 175 253 IPR005113 -
Vra3g0316 813 MobiDBLite consensus disorder prediction 392 417 - -
Vra3g0316 813 Gene3D - 582 747 IPR043153 -
Vra3g0316 813 MobiDBLite consensus disorder prediction 325 352 - -
Vra3g0316 813 PANTHER BNAA09G10210D PROTEIN 42 810 - -
Vra3g0316 813 SMART DENN_cls 283 685 IPR001194 -
Vra3g0316 813 ProSiteProfiles Tripartite DENN domain profile. 157 811 IPR037516 -
Vra3g0316 813 MobiDBLite consensus disorder prediction 336 352 - -
Vra3g0316 813 Gene3D - 108 332 - -
Vra3g0316 813 Pfam DENN (AEX-3) domain 582 684 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0316 Vra-Chr3 3725497 3735153 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0316 - - gmx:100791254 1331.62