Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0310 ATGGAGATTGGGGGTAGTTTCAGGAATGGCAGTTCATCCATTTGGAGGAACAGTGATGCGGATATTTTCTCAAACTCATTCCACAGAGAGGATGATGAAGAGGCTCTCAAATGGGCTGCCATACAGAAACTTCCCACCATTTCGCGTATGAGGAAAGCTTTGCTCACTTCATCCGAAGGGAGAGTGGATGAGATTGATGTGCACAAACTTGGGTTGCAAGAAAGGAGAGTCTTGCTTGAAAGACTGGTGAGAACTGCTCAAGAGGATAATGAGAAGTTTTTGCTCAAGCTAAGGGAACGTATTGATAGAGTTGGAATTGAACTTCCTGCTATAGAGGTTCGGTTTGAGAACTTGAATGTCCAAGCAGAAGCTCGTGTAGGAAATAGAGCTTTGCCTACCTTCACTAACTTCATGGTTAATATTGTGGAGGGTCTATTGAACTCTCTTTGTATTCTACGAAGTAGCAAACAACATATACGTATTCTCCAGGATGTCAGTGGAATAATAAAGCCTGGCAGAATGACATTACTTTTGGGCCCTCCGAGTTCCGGAAAAACCACACTATTGTTGGCCTTGGCAGCAAGACTTGATCCAAAGTTAAAGTTTTCTGGAAAGGTGACTTATAATGGTCATGGGATGGATGAGTTTGTACCCCAAAGAACTGCAGCATATGTCGATCAAAATGATCTTCACATTGCAGAGTTGACGGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTTCAAGGAGTTGGAACTAGATATGATTTGCTTGCAGAGTTGTCCAGAAGAGAAAAACAGGCAAATATCATGCCTGATCCTGATATTGATGTCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAGGCAAATTTGATAACAGATTACATCCTAAGGATTTTAGGACTTGAAATCTGTGCTGATATTGTTGTAGGAAATACAATGTTAAGGGGAATCTCTGGTGGACAAAAGAAACGCCTTACAACAGGAGAGATGCTGGTTGGACCAGCTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAACTCACTCAAGCAATCTGTTCACATTCTCAAAGGAACCACAGTGATCTCACTCTTGCAGCCAGCGCCGGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCTGATAGTCATATAGTGTACCAGGGTCCACGCGAATATGTGCTTGAATTTTTCGAATCAATTGGTTTTCAATGTCCTGAGAGGAAAGGTGTGGCAGATTTTTTGCAAGAAGTAACATCAAGGAAAGACCAAGAACAGTACTGGGCACACAAAGATCAACCTTATAGATTTATCACAGCCAAAGAGTTCTCAGAGGCACTCAAGTCATTTCATGTTGGGAGAAGCCTTCGTGAAGAACTTGATAGTGAATTTGACAAGTCTAAGAGTCACCCAGCTGCTTTGACAACCAAAAAGTTTGGAGTGGGGAAATGGGAACTGTTAAAAGCTTGCTTATCAAGAGAATATTTACTTATCAAACGCAATTCGTTTGTTTACACCTTCAGGCTGAGCCAACTTGCTGTAATGGCATTTATTACCATGACCATCTTCCTCCGGACTGGGATGCACAGAGACTCAGTGGCTGATGGCGGGATATATGTGGGTGCATTGTTCTATTGCCTTGTTGTGGTTATGTTCAATGGATTTGCTGAACTTTCCATGACCGTTTTGAAGCTTCCTGTTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTTCCTGCATGGATCCTAAAAATCCCTATGACTTTTGTGGAAGTTGCTGTTTGGCTATTCCTAACCTACTATGTAATTGGATTTGATCCAAATATAGGAAGATTTTTTAGACAATACCTTGTTCTTTTACTAGTGAACCAGATGGCTTCCGCATTATTCCGATTTATTGCAGGAATTGGGAGGGAATTGAAAGTAGCTTTAACTATTGGGTCATTTACACTAACCGTCCTTTTTGCTATGAGTGGTTTTATCTTATCAAAAGACAACATAAAAAAATGGTGGCTATGGGGCTTCTGGATATCACCTATGATGTATGGACAGAATGCTTTGGTAAATAATGAGTTCCTTGCAGAGAGATGGGGACATGTTCTACCAAACTCTACGGAGCCTCTTGGAGTCGAAGTTTTGAAATCACGGGGTTTCTTCGTTCAATCATATTGGTATTGGATAGGCGTTGCGGTTTTGTTTGGATATACATTACTTTTCAACTTTGGCTACATCCTTGCTCTTACGTATTTGAGCACACCTGGGAAGCAACATGCTTTTATATCCGAAGAACCTAAAAACAATGAGCAAAATGGTGGTAGTAATAAAGGAACTGATGTGATGAGATGCATAAAATATAAAGGTACTTCTTCTCTTAACAACAGAGAGAGAAAGGGCGAAAGTATATGTGGAAATACACCTTCTCATACTTTACCCACTGGAAATAGAGGAATGGTTCTTCCTTTTGAATCACATTCTATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCACAGGAAATGAGGAACCAAGGAGTTGTTGAGAATAAATTGGTTCTTTTGAAGGGTGTCAGTGGATCCTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACTGGAGCAGGCAAAACAACTCTGATGGATGTTCTTGCTGGTAGAAAAACCGGAGGGTATGTTGGAGGGAACATCAAAATCTCCGGGTATCAGAAGAAGCAAGAAACATTTGCAAGAATTTCAGGCTACTGCGAGCAAAACGACATCCACTCTCCTCATGTCACTGTGTATGAATCCTTGGTTTATTCAGCTTGGCTCCGATTGTCTCCAGACATCAATGCTCAAACCAGAAAGATGTTCATTGAGGAAGTTATGGAACTTGTGGAATTGAAACCACTAAGGCACGCAATAGTCGGATTGCCAGGTGTTGATGGTCTCTCAATAGAGCAACGTAAAAGGTTGACAATTGCGGTTGAACTTGTGGCAAATCCTTCCATAATATTCATGGATGAGCCAACCTCTGGGCTAGATGCAAGAGCAGCAGCTATTGTCATGAGAACGGTTAGAAACACTGTAGACACTGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGCTTTTTCTGATGAAGCAAGGAGGGCAAGAGATATATGCGGGGCCACTTGGACATCATTCTTCCAATTTAATCAATTACTTTGAGGAAATCCAAGGTATCAGTAAGATTAAAGATGGCTATAATCCAGCAACATGGATGATGGAAGTCACAAGTTCAGCAAAAGAATTGGAATTGGGGATTGATTTTGCCGATGTGTACAAAAATTCAGAGTTATATAGGAGAACCAAAGCACTAGTCAAAGAATTGAGTACTCCATCTCCTGGTTCGAAAGACCTTTATTTTCCTTCACAGTACTCAACGTCCTTCTTCACCCAATGCATGGCTTGCTTGTGGAAACAACATTGGTCTTACTGGCGCAATGCTCAATACACTGCCTTAAGATTTCTATACACAGCTACTGTAGCTGTTTTGCTTGGGAGCATGTTTTGGAACCTTGGCTCCAAAATTGAAAGGCAACAAGATCTTTTCAATTCAATGGGCTCCATGTATGCTGCTGTGCTCCTTCTTGGTGTTAAGAATTCTAATTCAGTACAACCAGTAGTTGCTGTTGAGCGGACAGTCTTTTATAGGGAAAGAGCAGCTGGAATGTATTCAGCTTTTCCATATGCTTTTGCTCAGGTTGTGATTGAGCTCCCATATGTACTTGGACAGGCTGCAGTATATAGCATTATAATTTATGCAATGATTGGTTATGAGTGGAGTGTGGCTAAATTTTTCTGGTGCCTATTCTTTATGTACTTTTCCTTCCTGTACTTCACCTACTACGGAATGATGGCAGTGGCAATGACCCCAAACCAACACATCTCCACTATAATTTCAGCTGGGTTTTATTCAGTGTGGAATATCTTCTCAGGATTCATAGTTCCACGGCCAAGGATCCCAGTATGGTGGAGGTGGTACAGTTGGGCAAATCCAATTTCTTGGAGTTTGTATGGATTGGTGGCTTCACAATATGGAGATATAAAGGAAAGCATTGAATCCACTGATGGGACAACAACAGTGGAAGGCTTTGTGAGAAGTTACTTTGGTTTCAGGCATGATTTTCTTGGAGTGGTTGCAGCTGTGATGATTGCATTCACACTAGTTTTTGCATTCGTCTTTGCTGTATCGGTGAAGATGTTTAATTTCCAGCGGCGTTAG 4335 0.4131 MEIGGSFRNGSSSIWRNSDADIFSNSFHREDDEEALKWAAIQKLPTISRMRKALLTSSEGRVDEIDVHKLGLQERRVLLERLVRTAQEDNEKFLLKLRERIDRVGIELPAIEVRFENLNVQAEARVGNRALPTFTNFMVNIVEGLLNSLCILRSSKQHIRILQDVSGIIKPGRMTLLLGPPSSGKTTLLLALAARLDPKLKFSGKVTYNGHGMDEFVPQRTAAYVDQNDLHIAELTVRETLAFSARVQGVGTRYDLLAELSRREKQANIMPDPDIDVYMKAVATEGQKANLITDYILRILGLEICADIVVGNTMLRGISGGQKKRLTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQSVHILKGTTVISLLQPAPETYNLFDDIILLSDSHIVYQGPREYVLEFFESIGFQCPERKGVADFLQEVTSRKDQEQYWAHKDQPYRFITAKEFSEALKSFHVGRSLREELDSEFDKSKSHPAALTTKKFGVGKWELLKACLSREYLLIKRNSFVYTFRLSQLAVMAFITMTIFLRTGMHRDSVADGGIYVGALFYCLVVVMFNGFAELSMTVLKLPVFYKQRDNLFFPSWAYALPAWILKIPMTFVEVAVWLFLTYYVIGFDPNIGRFFRQYLVLLLVNQMASALFRFIAGIGRELKVALTIGSFTLTVLFAMSGFILSKDNIKKWWLWGFWISPMMYGQNALVNNEFLAERWGHVLPNSTEPLGVEVLKSRGFFVQSYWYWIGVAVLFGYTLLFNFGYILALTYLSTPGKQHAFISEEPKNNEQNGGSNKGTDVMRCIKYKGTSSLNNRERKGESICGNTPSHTLPTGNRGMVLPFESHSITFDEVTYAVDMPQEMRNQGVVENKLVLLKGVSGSFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYVGGNIKISGYQKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLSPDINAQTRKMFIEEVMELVELKPLRHAIVGLPGVDGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKQGGQEIYAGPLGHHSSNLINYFEEIQGISKIKDGYNPATWMMEVTSSAKELELGIDFADVYKNSELYRRTKALVKELSTPSPGSKDLYFPSQYSTSFFTQCMACLWKQHWSYWRNAQYTALRFLYTATVAVLLGSMFWNLGSKIERQQDLFNSMGSMYAAVLLLGVKNSNSVQPVVAVERTVFYRERAAGMYSAFPYAFAQVVIELPYVLGQAAVYSIIIYAMIGYEWSVAKFFWCLFFMYFSFLYFTYYGMMAVAMTPNQHISTIISAGFYSVWNIFSGFIVPRPRIPVWWRWYSWANPISWSLYGLVASQYGDIKESIESTDGTTTVEGFVRSYFGFRHDFLGVVAAVMIAFTLVFAFVFAVSVKMFNFQRR* 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0310 1444 CDD ABCG_PDR_domain2 842 1079 IPR034003 -
Vra3g0310 1444 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1444 - -
Vra3g0310 1444 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1444 - -
Vra3g0310 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 844 1096 IPR003439 GO:0005524
Vra3g0310 1444 Gene3D - 857 1089 IPR027417 -
Vra3g0310 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 146 419 IPR003439 GO:0005524
Vra3g0310 1444 Pfam Plant PDR ABC transporter associated 715 778 IPR013581 -
Vra3g0310 1444 Gene3D - 148 458 IPR027417 -
Vra3g0310 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 419 IPR027417 -
Vra3g0310 1444 Pfam ABC-2 type transporter 498 710 IPR013525 GO:0016020|GO:0140359
Vra3g0310 1444 Pfam ABC-2 type transporter 1169 1383 IPR013525 GO:0016020|GO:0140359
Vra3g0310 1444 Pfam ABC-transporter N-terminal 86 137 IPR029481 -
Vra3g0310 1444 Pfam ABC transporter 872 1024 IPR003439 GO:0005524
Vra3g0310 1444 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Vra3g0310 1444 SMART AAA_5 881 1073 IPR003593 -
Vra3g0310 1444 SMART AAA_5 171 396 IPR003593 -
Vra3g0310 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 859 1079 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0310 Vra-Chr3 3674199 3682627 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0310 K08711 - gmx:732607 2428.67