Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0307 ATGAGACGGCGCCCTGTGGCGGCCATTCTCCCTGACCAGATGGAGAAACCCTCCGCCAGGAACCCTAATTCCCGCATCTGCTTCCTGGCAACACTCTCCGCATTCTTCTGGTTCCTCCTCCTCTACTTCCACTTCGCCGTTCTCGGAAACCAATCCCCCAAACTAACCCCTATCACCGTCACCTTTCAGCAACCTCGCAAAAGCCTCGGCTCCCAAACCCTAACCGAAGCCCCTCCGCCACCCTCCTTTCCCTTCGCACGTGCCCTCCAGACCGCCCTCAACAAGTCCGACAGGTGTGGAGGCCGCTACATCTACGTCCATGACCTCCCCTCCCGCTTCAACGAGGACATGTTGAAGAAGTGCAGAACGCTTTCCCTCTGGACCAACATGTGCAAGTTCACTACCAACGCCGGCCTCGGCCCCCCCTTGGAAAACGTTAAGGGCGTCTTCTCTGACACCGGCTGGTACGCTACCAATCAGTTCGTCGTTGACGTCATCTTCAGCAACCGGATGAAACAGTACGACTGCCTCACTCAGGACCCTTCCCTTGCCGCTGCATTCTTCGTCCCCTTCTACGCCGGCTTCGACATCGCCCGCTACCTCTGGGGCTATAACATATCCGTCAGAGACTCTGCGTCGCTTGATCTCGTTGACTGGCTTGTGAGGAGGCCCGAGTGGAAGATCATGAACGGGAGGGACCATTTTCTCGTGGCGGGGAGGATCACGTGGGATTTTAGAAGACTCACTGAGGACGAATCGGATTGGGGGAACAGGCTTTTGTTTCTACCTGCGGCGCGGAACATGTCCATGCTTGTGGTGGAGTCGAGTCCCTGGAATGCGAATGATTTTGGGATTCCTTATCCCACCTATTTTCACCCTGCTAAGGATGATGATGTGTTCATTTGGCAGGAGAGGATGCGGAGGTTGGAGAGGAAGTGGTTGTTTTCTTTCGCCGGGGCTCCACGTCCGGATAACCCGAAATCGATTCGGGGGCAGATTATTGATCAGTGTAAGAGATCCAAGGTGGGTAAGTTGCTGGAGTGTGATTTTGGGGAGAGTAAGTGTCATTCCCCCAGTAGCATAATGCAGATGTTTCAAGGGTCACTTTTCTGCCTTCAGCCTCAAGGGGATTCCTATACCCGACGATCTGCTTTTGATTCAATGCTAGCTGGGTGTATACCTGTGTTTTTTCATCCGGGTTCGGCTTACACTCAATACACTTGGCACCTTCCCAAGAATTATACTAAGTATTCGGTGTTCATTCCGGAGGACGATATTCGGAAGAGGAATGTCAGTATAGAAGAGAGGCTTAGACAGATTCCCGAGGAGGAAGTCAGGATCATGAGAGAGGAGGTCATTAGTTTGATCCCTAGATTGGTGTACGCGGATCCTCGATCCAAACTTGAGACTCTTAAGGATGCGTTTGATGTTTCGGTGCAGGCTGTGATTGACAAGGTTACCAATTTGAGGAAGGACATCATGGAAGGTCGCACCGATGATAATTTCATTGAGGAGAATAGTTGGAAGTATGCGTTGTTGGATGCGGGACAGCGCGAGGTTGGACCTCATGAATGGGATCCCTTCTTTTCTAAACCCAAGGATGGAAATGCGGATTCCAGTGATTTGTCTTCTGAGGCTGCAAAGAATTCTTGGAAAAATGAGCAAAGGGATACTTCTTGA 1680 0.5173 MRRRPVAAILPDQMEKPSARNPNSRICFLATLSAFFWFLLLYFHFAVLGNQSPKLTPITVTFQQPRKSLGSQTLTEAPPPPSFPFARALQTALNKSDRCGGRYIYVHDLPSRFNEDMLKKCRTLSLWTNMCKFTTNAGLGPPLENVKGVFSDTGWYATNQFVVDVIFSNRMKQYDCLTQDPSLAAAFFVPFYAGFDIARYLWGYNISVRDSASLDLVDWLVRRPEWKIMNGRDHFLVAGRITWDFRRLTEDESDWGNRLLFLPAARNMSMLVVESSPWNANDFGIPYPTYFHPAKDDDVFIWQERMRRLERKWLFSFAGAPRPDNPKSIRGQIIDQCKRSKVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNVSIEERLRQIPEEEVRIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDIMEGRTDDNFIEENSWKYALLDAGQREVGPHEWDPFFSKPKDGNADSSDLSSEAAKNSWKNEQRDTS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0307 559 MobiDBLite consensus disorder prediction 523 559 - -
Vra3g0307 559 Pfam Exostosin family 99 436 IPR040911 -
Vra3g0307 559 PANTHER BNAA09G10260D PROTEIN 91 513 - -
Vra3g0307 559 PANTHER BNAA09G10260D PROTEIN 16 73 - -
Vra3g0307 559 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 91 513 IPR004263 GO:0006486|GO:0016757
Vra3g0307 559 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 73 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0307 Vra-Chr3 3612622 3616248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0307 K20888 - gmx:100811811 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0307 3 3612622 3616248 Vra3g0307 3 3612622 3616248 ECH