Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0295 ATGGCCAAGTGTCTGGCGCTCTCTCTGATCACATTAGGCCTCTTCATTGGGTTGTTGAGTCCACAATGGAACATACTGAACCTAGGATGGGGAAAAAGGGTTGAGGAAGTGAATCCGGAATGGAACATACTGAACCGAATATTGAGAGAGAAAGTGGTTGGAGACAACTTGAAGAGCTACTGTGAGAGTTGGAGGATCAATGTTGAACTAAACAACATTAGAGGGTTCAGTGTTGTGCCTCAAGAATGTGTGGAGCACGTGAAGAAGTACATGACTTCATCTCAGTACAAAGCTGACTCTAGGAGGGCAGTGGAGGAGATTAGGCTCTATCTCAGTGGGTTCTGCACTTTGAAAGGTGATGGCAAAGATTCCTGGATTTTTGATATTGATGAGACCCTTTTGTCCACAATTCCTTATTATAAGAAGCATGGTTTTGGGGGAGAAAAGTTGAATTTAACATCTTTGGAAGCATGGATGAAGCAAAGCAAGGCACCAGCTCTTGATCACACATTGGAGCTCTTTCATGAAATAAAGAACAGAGGCTTCAAAATCTTTCTGGTTTCTTCAAGAAAGGAAAGCCTTAGATCTGCCACAGTAGACAACCTAGTCAATGTTGGGTACCATGGTTGGACTACTCTTAAATTGAGGGGTTTTGATGATGAATTGGTGGAAGTAAAAAAATACCATTCTAAGGTGAGAGAAGAATTGGTTGATGAGGGTTATCGCATATGGGGCATTGTTGGAGATCAATGGAGCACTTTTGATGGACTTCCTATCCCAAACAGAACATTCAAACTACCAAATTCCATTTACTACAAAGCATAA 825 0.417 MAKCLALSLITLGLFIGLLSPQWNILNLGWGKRVEEVNPEWNILNRILREKVVGDNLKSYCESWRINVELNNIRGFSVVPQECVEHVKKYMTSSQYKADSRRAVEEIRLYLSGFCTLKGDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNLTSLEAWMKQSKAPALDHTLELFHEIKNRGFKIFLVSSRKESLRSATVDNLVNVGYHGWTTLKLRGFDDELVEVKKYHSKVREELVDEGYRIWGIVGDQWSTFDGLPIPNRTFKLPNSIYYKA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0295 274 PIRSF VSP 14 274 IPR014403 -
Vra3g0295 274 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 57 273 IPR005519 -
Vra3g0295 274 PANTHER ACID PHOSPHATASE 1 1 273 - -
Vra3g0295 274 SUPERFAMILY HAD-like 116 257 IPR036412 -
Vra3g0295 274 Gene3D - 57 274 IPR023214 -
Vra3g0295 274 TIGRFAM plant-AP: plant acid phosphatase 54 272 IPR010028 GO:0003993
Vra3g0295 274 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 1 273 - -
Vra3g0295 274 CDD HAD_VSP 87 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0295 Vra-Chr3 3508667 3511115 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0295 - - gmx:100811100 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0295 3 3508667 3511115 Vra3g0295 3 3508667 3511115 ECH