Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0275 ATGGCTTCTTTAGTATCTTCACCGTTTACTCTACCAAGCTCTAAACCTGACCAGCTTCATTCTCTTGCCCAAAAGCGTCTTTTTCTTCATTCTTTCCTTCCCAAGAAGGCTGGTTATAATGGTAGCTCAAAATCCTCTCTGAGAGTGAAATGCGCTGCCGTTGGCAATGGTCTATTCACCCAAACCAGCCCAGAAGTTCGTAGAATTGTCCCAGAGAATGACCAAAACTTGCCAACGGTTAAAATTGTGTATGTGGTCCTTGAGGCCCAGTATCAATCATCTCTCACTGCTGCAGTCCTGGCTCTCAACAGTAAAAGGAAACATGCTTCCTTTGAGGTTGTGGGTTACTTGGTTGAGGAGCTTCGAGACGCTTCAACGTATGAGACTTTCTGCAAGGACTTGGAGGATGCTAACGTCTTCATTGGGTCTTTGGTTTTTGTGGAGGAGCTTGCTCTCAAGATCAAAGCTGCAGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAAGTGATGAGGCTTAACAAATTGGGTTCCTTCAGCATGTCACAGCTTGGGCAATCTAAGAGCCCCTTTTTCCAGCTCTTCAAGAGAAAGAAGCCTCAGTCTGCTGGCTTTGCCGACAGCATGTTGAAGCTTGTGAGGACATTGCCAAAGGTTTTGAAGTATTTGCCAAGTGATAAAGCTCAGGACGCCAGGCTCTATATACTGAGTCTACAATTTTGGCTTGGAGGATCTCCTGATAACTTGCAGAACTTCCTGAAAATGATTAGTGGATCTTATATTCCAGCACTGAAAGGTACAAAGATCGAGTATTCTGAGCCGGTTTTGTACTTGGACAATGGAATTTGGCACCCTTTGGCTCCTTGTATGTACGATGATGTGAAGGAGTATTTGAATTGGTATGGTACTAGAAGGGATGCAAATGAGAAGCTGAAGTCTTCGAATGCACCTGTCATTGGTTTGGTTTTGCAAAGGAGTCATATCGTGACTGGTGATGATGGACACTATGTGGCTGTGATCATGGAGCTGGAAGCTAGAGGGGCTAAGGTCATTCCCATTTTTGCTGGTGGACTTGACTTTTCAGGGCCAGTGGAGAAATTCTTCATTGATCCAATTACGAAGAAACCGTTTGTGAATTCTGTAGTATCCCTCACTGGCTTTGCTCTTGTCGGAGGGCCAGCAAGACAGGACCATCCAAGGGCAGTTGAGGCTTTGATGAAACTTGATGTGCCTTACATTGTTGCCCTGCCACTGGTGTTTCAGACAACAGAAGAATGGCTCAACAGCACTCTTGGTCTGCATCCAATACAGGTTGCTCTTCAAGTTGCTCTGCCTGAGCTAGATGGAGGCATGGAGCCAATTGTTTTTGCTGGTCGAGATCCTAAAACAGGAAAATCTCACGCTCTTCATAAGAGAGTGGAGCAACTCTGCATCAGGGCAATCAGATGGGCTGAATTGAAAAGAAAATCAAAGGAAGAGAAGAAACTAGCAATCACCGTCTTCAGTTTCCCTCCGGACAAAGGAAATGTGGGAACTGCTGCCTATCTGAATGTCTTTGCCTCCATATACTCAGTTATGAAAGAACTAAAACAAGATGGTTATAATGTTGACGGCCTTCCAGAGACTCCAGAAGCTTTGATTGAAGACGTAATTCATGACAAAGAAGCTCAATTCAGCAGTCCAAATTTGAACGTTGCTTACAAAATGAGCGTCCGAGAGTACCAAAATTTGACTCCTTATTCCACGGCACTGGAAGAGAATTGGGGGAAACCCCCTGGCAATCTGAATGCAGATGGAGAAAATCTGTTGGTATATGGGAAACAATACGGTAATGTCTTCATAGGTGTTCAGCCTACATTTGGCTATGAAGGGGATCCAATGAGGCTGCTTTTCTCCAAATCTGCCAGCCCTCATCATGGATTTGCAGCATTTTATTCATTTGTTGAGAAAATCTTCAAAGCTGATGCTGTGCTTCATTTTGGTACGCATGGTTCCCTTGAATTCATGCCTGGAAAACAGGTGGGGATGAGTGATGTCTGTTATCCTGACAGTCTAATTGGTAATATTCCAAATGTGTATTACTATGCTGCAAACAACCCTTCTGAGGCCACCATAGCCAAGCGCAGAAGTTATGCAAACACCATTAGCTATCTGACTCCTCCAGCGGAAAATGCTGGACTGTACAAAGGTCTTAAGCAGTTAAGTGAGCTCATCTCCTCATATCAGTCCCTCAAAGACACCGGCCGTGGGGCACAAATTGTGAGTTCAATTATCAGCACAGCTAAACAGTGTAATCTTGACAAAGATGTGACACTACCAGATGAGGGTGAGGAGATCCCACCTAAAGAGCGTGATCTGGTGGTTGGAAAGGTGTATTCCAAGATCATGGAGATCGAGTCTCGTCTGCTACCTTGTGGGCTTCATGTCATTGGAGAGCCTCCCTCAGCTTTGGAAGCAGTTGCTACACTGGTGAACATTGCTGCACTTGATCGTCCTGAAGATAATATTTCTTCTCTTCCATCAATATTAGCTGAAACTGTTGGAAGAGATATAGAAGATGTGTACAGAGGAAGTAACAAAGGAATATTGAAGGATGTAGAACTTCTTAGGCAAATAACAGAGGCGTCACGTGGAGCAATTACTGCCTTTGTGGAGCGCACTACCAATAGTAAGGGTCAAGTTGTTGATGTAGCTGATAAGCTTACCTCAATCCTTGGATTTGGCATAAATGAGCCATGGATTCAGTACTTGTCAAACACCAAATTTTACCGAGCTGATAGGGAAAAACTTAGAATCTTGTTTATGTTCCTGGGAGAATGCTTGAAGTTGGTTGTGGCTGATAATGAAGTGGGAAGTTTAAAGCAAGCCTTGGAAGGTAAATATGTGGAGCCAGGGCCTGGTGGTGACCCAATCAGAAATCCTAAAGTTTTGCCAACGGGAAAGAATATCCATGCCTTGGACCCACAAGCTATTCCTACAACTGCTGCAATGCAGAGTGCTAAAATAGTGGTAGATAGGTTGATTGAGAGGCAGAAAGTTGAGAATGGTGGAAAATATCCCGAGACAATTGCCCTTGTATTGTGGGGAACTGATAATATTAAAACATATGGTGAATCACTGGCTCAAGTCTTGTGGATGATTGGTGTGATGCCGGTGGCTGATACCCTTGGTCGGGTAAATCGGGTGGAACCTGTAAGCCTTGAAGAGCTTGGAAGGCCTAGGATTGATGTTGTTGTTAACTGCTCAGGAGTGTTTAGAGACCTTTTCATCAATCAGATGAACCTTCTAGACAGAGCAGTGAAAATGGTTGCTGAATTAGATGAACCAGCAGAGCAAAACTATGTAAGAAAGCATGCGTTAGAACAAGCTCAAGCCCTTGGAGTTGAAGTTCGAGAGGCAGCAACAAGGATCTTCTCCAATGCCTCCGGCTCCTACTCCTCAAACATAAACCTGGCTGTGGAGAATTCCTCATGGAATGATGAGAAGCAGCTTCAGGACATGTATCTTAGCAGAAAGTCTTTTGCCTTTGATTGTGATGCCCCTGGTGCTGGCATGACTGAGAAAAGAAAAGTTTTTGAGATGGCTCTCAGCACAGCAGATGCCACATTCCAAAACCTTGATTCATCAGAAATTTCCCTCACTGATGTTAGTCATTACTTTGACTCTGATCCAACTAATCTGGTTCAAAATCTAAGGAAAGATGGGAAGAAGCCCAGTGCATACATTGCCGATACAACTACAGCCAATGCTCAGGTTCGCACACTTTCTGAGACAGTTAGACTTGACGCAAGAACCAAACTGTTGAACCCAAAGTGGTATGAAGGCATGTTGTCTACTGGGTATGAAGGTGTTCGTGAGATTGAGAAGAGACTAACCAATACAGTGGGATGGAGTGCAACTTCAGGCCAAGTTGACAACTGGGTGTACGAAGAAGCCAACACAACTTTCATTCAAGATGAGCAAATGCTGAACAAGCTCATGAACACTAATCCAAACTCCTTCAGGAAGCTGGTGCAGACATTCTTGGAAGCCAATGGACGTGGTTACTGGGAAACTGCAGAAGAGAATATCGAGAAGCTCAGGCAGTTGTATTCGGAGGTGGAAGACAAAATTGAAGGCATTGATCGTTAA 4152 0.4429 MASLVSSPFTLPSSKPDQLHSLAQKRLFLHSFLPKKAGYNGSSKSSLRVKCAAVGNGLFTQTSPEVRRIVPENDQNLPTVKIVYVVLEAQYQSSLTAAVLALNSKRKHASFEVVGYLVEELRDASTYETFCKDLEDANVFIGSLVFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKPQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYIPALKGTKIEYSEPVLYLDNGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSSNAPVIGLVLQRSHIVTGDDGHYVAVIMELEARGAKVIPIFAGGLDFSGPVEKFFIDPITKKPFVNSVVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCIRAIRWAELKRKSKEEKKLAITVFSFPPDKGNVGTAAYLNVFASIYSVMKELKQDGYNVDGLPETPEALIEDVIHDKEAQFSSPNLNVAYKMSVREYQNLTPYSTALEENWGKPPGNLNADGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAFYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGAQIVSSIISTAKQCNLDKDVTLPDEGEEIPPKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDNISSLPSILAETVGRDIEDVYRGSNKGILKDVELLRQITEASRGAITAFVERTTNSKGQVVDVADKLTSILGFGINEPWIQYLSNTKFYRADREKLRILFMFLGECLKLVVADNEVGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVDRLIERQKVENGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVMPVADTLGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEQNYVRKHALEQAQALGVEVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMTEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEQMLNKLMNTNPNSFRKLVQTFLEANGRGYWETAEENIEKLRQLYSEVEDKIEGIDR* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0275 1383 Pfam CobN/Magnesium Chelatase 246 1363 IPR003672 GO:0009058
Vra3g0275 1383 Pfam Domain of unknown function (DUF3479) 81 242 IPR022571 GO:0016851
Vra3g0275 1383 TIGRFAM BchH: magnesium chelatase, H subunit 81 1381 IPR011771 GO:0015995|GO:0016851
Vra3g0275 1383 Coils Coil 1357 1383 - -
Vra3g0275 1383 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 83 1382 IPR003672 GO:0009058
Vra3g0275 1383 CDD CobN_like 156 1254 IPR003672 GO:0009058
Vra3g0275 1383 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 83 1382 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0275 K03403 - gmx:100787735 2672.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0275 3 3128324 3134976 Vra3g0275 3 3128324 3134976 ECH