Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0274 ATGGCTGAATATTTTGTCTTCGAGATTGCTGAATCATTGCTGGGGAAGCTTGCATCTAATCTTTATGAAGAAGTTTCTCGAGCCTTTGATCTGTATGAGGATGTGCAAAGTTTCAGAGATACCTTGTCAATTGTAAAAGGCGTGCTGTTGGATGCTGAGGAGAAGAAGGAGAAGAAGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAACGTATGCTTAGATGCTGAAGATGTGTTGGATGGATTTGAGTGCCAAAACCTCAGAAAACAAGTTCTCAAAGCTTCCGGCACCACCAGGATGAAGGTAAACCACTTCTTTTCTTCATCTAATTCTCTTGTTTTCCGTTTTAGGATGGCTAGGAAAATAAAAAATGTTACACGTAGATTGGATAAGATAGCAGCTGATGGGAACAAGTTTGGTCTTGAGAGGATTGTTATTGATCACAGTCCTCTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCGGGGGTGATTGGAAGGGAGAGTGATAGGGAACAGATTATCAAGCTTTTGATGCAACCTCACCCTAATGGTGATGGTTATGGAGATCAAAGCGTTTGTGTTATTCCCATAGTGGGTATTGGAGGGTTGGGAAAGACCACACTTGCAAAGTTGGTGTTCAGTGATGAGAGAATGGATGGTCTTTTCCAGTTGAAAATGTGGGTGTGTATNTCTGATGACTTTGACATAAGACATATACTTATTAAAATCATCAACTCTGCTTCTGATCCAACCATTTCTGTTGTTCCTCAAGAAAGCATGAACAACNTAGATATTGAGCAGTTACAAGGTCGTCTTAGACACAAACTTTCTNGTCAGAAGTATCTACTAGTCTTGGATGACGTATGGAATGATAATCGTGCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTGGGTGCAGTAGGAAGCAAAATCTTGGTGACAACACGAAGTACCNNAATTGCTTCAATGATGGGCACTGTTCCCTCGTATGTTTTANAAGGTCTTTCTGTGGAGAATTGCNTATCTCTGTTTCTGAAATGGGCATTTAGGGAAGGNGAAGAAAAAGAACATCCATATCTAGTGGATATNGGAAAAGAAATAGTGAAAAAGTGCCGAGGGGTTCCACTAGCAGTGAAAACTTCAGGAAGTTCCCTGTTCTCAGTTTTTGATTCACAAAGATGGGAAATTATGAGAGACCATGAGCTATGGAACCTGAAACAACAGAAAGATGACATTTTACCTTCCCTAAAGTTGAGCTATGATCAAATGCCATCCTATTTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCCAAAGATTTTGGCTTTACCAGTGCTGAAATNGCTAACTTTTGGGCCACNCTTGGATTACTTCGATCNCCATTTGGAAGTCAAAAGATAGAGAATATTGGAAAAGCATATATTAATGAGTTATATTCAAGGTCATTTTTGGAAGACTTTGAGGACTTTGGCACAATTTATTATTTTAAACTACATGATTTGGTACACGATCTTTCGCTGTATGTTGCGAAAGAAGAGTTTCTAATGGTGAACTCCAATAGTCGCAATATACCAGAGCAAGTAAGGCATATGTCAGTTGTTGAAAATGATTCACTAAGCCATAGTTTGTTCCCCAAGTCCAGATGTGTGAGAACTATAATATTTCCCGTTAATGGAGTGGGTGTTGGCAGTGAGTCTCTTTTGGAAACATGGATAGAAAGATACAAGTACTTACGACATTTAGATTTAAGTAATTCATCTTTTGAGAAACTTCCTAATTCAATTGCTCAATTGGAGCATCTGCGAGCTCTCAGCCTTGACAATAATTCCAAAATAAAAAAGCTTCCTAATTCTATTTGCAGACTCCAAAACTTACAAATGTTGTCTTTGAGAAGATGCTTGGGGCTTGAAACATTGCCTAAACGATTAGGGATGTTAATCAGCCTCCGAAAAATGTATATAACCACAAAGCAGTCTATTTTGTCAGAGGATGAATTTGCAAGTTTGATCAATCTTCATACTCTGATTTTTGAATACTGTGACAATTTGAAGTTTTTGTTCCGAGGGGCACAGGTACAACTCTCGTCCCTGGAGGTTTTGATCATTCAATCATGTGGGAGCCTAGAGTCCTTACCTCTTCATATTCTCCCTAAACTTGAGGTTCTGATTGTAACAAGGTGCGTGATGCTAAATCTGTCCTTGAACAGTGAAAGACCAATCCAAAAATTGAAGATGAAATATTTGCATATTGAGCATTGTCCACGGCAACACACGCTGCCTGAATGGATTCAAGCAGCCTCCGACTCTTTGAGAACATTGTTAATTTTAAATTTTCATTGTCTGGAGATGCTTCCGGAGTGGCTTAGCACAATGACAAGTCTTAAGATGCTCCATATTGTTAACTGTCCTCAGTTGTTTCATCTGCCATGTGACATGCATTGTCTAAGCGCCCTAGAAGATTTGATAATAGATGGTTGTCCTGAATTGGGTAGAAAATGTGAACCTCATTCTGGTGAGTATTGGTCCTTCATCGCTCACATCAAATGTGTTTCTATTGGAGAAACAAGAAAAAGGAAACTCCTTTTTCAAATGCTTTCACGACTGGGCTTGAACTGCACTTAG 2637 0.3902 MAEYFVFEIAESLLGKLASNLYEEVSRAFDLYEDVQSFRDTLSIVKGVLLDAEEKKEKKHGLREWLRQIQNVCLDAEDVLDGFECQNLRKQVLKASGTTRMKVNHFFSSSNSLVFRFRMARKIKNVTRRLDKIAADGNKFGLERIVIDHSPLQRREMTYSHVDASGVIGRESDREQIIKLLMQPHPNGDGYGDQSVCVIPIVGIGGLGKTTLAKLVFSDERMDGLFQLKMWVCXSDDFDIRHILIKIINSASDPTISVVPQESMNNXDIEQLQGRLRHKLSXQKYLLVLDDVWNDNRAKWIELKDLIKVGAVGSKILVTTRSTXIASMMGTVPSYVLXGLSVENCXSLFLKWAFREGEEKEHPYLVDXGKEIVKKCRGVPLAVKTSGSSLFSVFDSQRWEIMRDHELWNLKQQKDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFGFTSAEXANFWATLGLLRSPFGSQKIENIGKAYINELYSRSFLEDFEDFGTIYYFKLHDLVHDLSLYVAKEEFLMVNSNSRNIPEQVRHMSVVENDSLSHSLFPKSRCVRTIIFPVNGVGVGSESLLETWIERYKYLRHLDLSNSSFEKLPNSIAQLEHLRALSLDNNSKIKKLPNSICRLQNLQMLSLRRCLGLETLPKRLGMLISLRKMYITTKQSILSEDEFASLINLHTLIFEYCDNLKFLFRGAQVQLSSLEVLIIQSCGSLESLPLHILPKLEVLIVTRCVMLNLSLNSERPIQKLKMKYLHIEHCPRQHTLPEWIQAASDSLRTLLILNFHCLEMLPEWLSTMTSLKMLHIVNCPQLFHLPCDMHCLSALEDLIIDGCPELGRKCEPHSGEYWSFIAHIKCVSIGETRKRKLLFQMLSRLGLNCT* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0274 878 SUPERFAMILY L domain-like 502 860 - -
Vra3g0274 878 PRINTS Disease resistance protein signature 198 213 - -
Vra3g0274 878 PRINTS Disease resistance protein signature 279 293 - -
Vra3g0274 878 PRINTS Disease resistance protein signature 376 390 - -
Vra3g0274 878 PRINTS Disease resistance protein signature 697 713 - -
Vra3g0274 878 PANTHER DISEASE RESISTANCE PROTEIN RP 6 746 IPR044974 GO:0006952
Vra3g0274 878 Gene3D - 10 124 - -
Vra3g0274 878 Pfam Rx N-terminal domain 11 100 IPR041118 -
Vra3g0274 878 Gene3D - 425 512 IPR036388 -
Vra3g0274 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 438 IPR027417 -
Vra3g0274 878 Gene3D - 153 334 IPR027417 -
Vra3g0274 878 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 746 - -
Vra3g0274 878 CDD RX-CC_like 12 134 IPR038005 -
Vra3g0274 878 Pfam Leucine rich repeat 582 638 IPR001611 GO:0005515
Vra3g0274 878 Gene3D - 339 424 IPR042197 -
Vra3g0274 878 Gene3D Ribonuclease Inhibitor 517 857 IPR032675 -
Vra3g0274 878 Pfam NB-ARC domain 193 426 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0274 Vra-Chr3 3124436 3127462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0274 572 689 Receptor kinase-like Gene Family AT3G11080 31.933 4.49e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0274 - - gmx:100794422 1329.31