Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0273 ATGGCTGAATATTTTGTCTTCGAGATTGCTGAATCACTGCTGGGGAAGCTTACATCTAATCTTTATGAAGAAGTTTCTCGAGCCTTTGATCTGTATGAGGATGTGCAAACATATATTAATGAGTTATATTCAAGGTCATTTTTGGAGGACTTTGAGGACTTTGGCACAGTTTATTATTTTAAACTACATGATTTGGTACATGATCTTTCGCTGTATGTTGCGAAAGAAGAGTTTCTAATGGTGAACTCCAATAGTCGCAATATACCAGAGCAAGTAAGGCATATATCAGTTGTTGAAAATGATTCACTAAGCCATAGTTTTTTTCCCAAGTCCAGAGGTTTGAGAACTATAATATTTCCCGTTAATGGAGTGGGTGTTGGCAGTGAATCTCTTTTGGAAACTTGGATAAAAAGATACAAATACTTACGGCATTTAAATTTAAGTAATTCCTCTTTTGCGACACTTCCTAATTCAATTTCTAAATTGGAGCATCTGCGAGCTCTCATTCTTGACAAGAACTTCAAAATAAAAAGACTTCCTAATTCTATTTGCAGACTCCAAAACTTACAAAAGTTGTCTTTGAGAAGATGCTCGGGGCTTGAAACATTGCCTAAACGATTAGGAATGTTAATCAGCCTCCGAAAATTGTTTATAACCACAAAGCAATCTGTTTTGTCAGAGGATGAATTTGCAAGTTTGAACAATCTTCATACTCTGATTTTTGAATACTGTGACAATTTGAAGTATTTGTTCCGTGGGGCACAGGCACAACTCTCGTCCCTTGAGGTTTTGATCATTCAATCATGTGGGAGCCTAGAGTCCTTACCTCTTCATATTCTCCCTAAACTTGAGGTTCTGATTGTAACAAGGTGCGTCATGCTAAATCTGTCCTTGAACAGTGAAAGACCAATCCCAAGATCGAAGATGAAATATTTGCATATTGAGCATTGTCCACGGCAACACACGCTGCCTGAATGGATTCAAGCAGCCTCCAACACTTTGAGAACACTGTCAATTTTAAATTGTCATTGTCTTGAGATGCTTCCCGAGTGGCTTAGCACAATGACTCATCTTAAGATGCTCCATATAGTTAACTGTTCTCAGTTGTTTCATCTCCCAAGTAACATGCACTGCCTAAGAGCCCTTGAAGATTTGATCATAGATGGTTGTCCTGAATTGGGTCGAAAATGTGAACCACATTCTGGTGAGTACTGGTCCGTCATCGCTCACATCAAATGTGTTTCTATTGGAGAAACAAGAAAAAAGAAACTCCTTTTCCAATTGCATTCCCGAATGGGCTTGAACTGCACTTAG 1314 0.3843 MAEYFVFEIAESLLGKLTSNLYEEVSRAFDLYEDVQTYINELYSRSFLEDFEDFGTVYYFKLHDLVHDLSLYVAKEEFLMVNSNSRNIPEQVRHISVVENDSLSHSFFPKSRGLRTIIFPVNGVGVGSESLLETWIKRYKYLRHLNLSNSSFATLPNSISKLEHLRALILDKNFKIKRLPNSICRLQNLQKLSLRRCSGLETLPKRLGMLISLRKLFITTKQSVLSEDEFASLNNLHTLIFEYCDNLKYLFRGAQAQLSSLEVLIIQSCGSLESLPLHILPKLEVLIVTRCVMLNLSLNSERPIPRSKMKYLHIEHCPRQHTLPEWIQAASNTLRTLSILNCHCLEMLPEWLSTMTHLKMLHIVNCSQLFHLPSNMHCLRALEDLIIDGCPELGRKCEPHSGEYWSVIAHIKCVSIGETRKKKLLFQLHSRMGLNCT* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0273 437 Gene3D Ribonuclease Inhibitor 76 414 IPR032675 -
Vra3g0273 437 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 31 347 - -
Vra3g0273 437 SUPERFAMILY L domain-like 62 420 - -
Vra3g0273 437 PANTHER DISEASE RESISTANCE PROTEIN RP 31 347 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0273 Vra-Chr3 3114504 3117279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0273 136 239 Receptor kinase-like Gene Family AT2G15080 35.514 1.92e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0273 - - pvu:PHAVU_001G1325000 603.979