Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0271 ATGGCTGTGAAGGACGACGTGGAAATATTTAAGGCTCGCATCGACAAGAGGGATTACAGAAGAGTCGTGCTTAGCAACTCACTCCAAGTGCTCCTCATTAGCGATCCCGTTACCGATAAGTGTGCTGCTTCCATGAACGTTGGCGTTGGTTACTTCAGTGATCCTGCTGGCCTCGAAGGCCTCGCCCATTTCCTCGAACACATGCTGTTTTATGCGAGTGAAAAATACCCAGTTGAAGATAGCTACTCCAAGTATATTAGTGAGCATGGAGGAAGCACCAATGCTTTTACATCATCTGAACACACCAACTATTATTTTGAAGTTAACACAGACGGCTTTGAAGAGGCCCTGGACAGATTTGCTCAGTTCTTTACTAAACCATTGATGTCTCCTGATGCCACCATGAGGGAAATTAAAGCTGTTGATTCTGAAAACAAGAAGAATTTATTATCTGATGCATGGAGAACGAACCAGCTTCAGAAACATCTCAGTGATGAAGGTCATCCATATCATAAATTTAGCACAGGGAACTGGGACACTTTGGAAGTTAAACCTAAAGCAAGAGGATTAGACACAAGGGAGGAGCTTCTCAAGTTTTATGATGAAAACTATTCTGCTAATTTAATGCATCTAGTTGTATACACAAATGAAAGCCTTGATGAAATTCAAAACCTTGTAGAAGAAAAGTTCCAGGATATTAGAAACACCAACAAAAGTTGTTTCCATCCTTGTGGTCAGCCATGCAAATCAGAACATTTGCAGATTGTTGTCAGGACTGTCCCAATAAAGCAAGGTCATAAATTGAGAATCACATGGCCAGTAACCCCTGAAATTCATCATTACACCGAAGGGCCAAGCAGGTATCTCGGCCATCTCATTGGTCATGAAGGAGAAGGGTCTTTATATTACATCTTAAAAAAATTGGGGTGGGCTACAAGCTTGTCTGCAGGTGAATCAGATTGGAGTTTGGATTTCGCATTCTTTTCAGTTGTAATTGATCTTACTGATTCTGGTCATGAGCACGTAGAAGATATCATTGGGTTGTTGTTCAAATACATCGAGCTTCTACAACACTCTGGTGTTTGCGAATGGATTTTTAAAGAGCTTTCAGCAATTTGTGAGACCAAGTTCCATTATCAGGACAAAATTCCTCCCAATGATTATGTTGTTGATATTGCATCAAATATGCAGTTTTATCCTGTGAAAGATTGGTTGACAGGATCATCCTTGCCTTTTAAGTTTAGCCCAAATGTTATCCATATGGTACTAGGTCAGCTTTCTCCAGACAACGTTCGAATCTTTTGGGTGTCCAAAAATTTTGAAGGGCATACTGATAAGGTGGAGCCATGGTATGGAACTGGGTATTCCCTTGAAAAGATCACTGGCTCTGTTATTCAGGGGTGGATGGCTTCTGCTCCTAATGAAAACTTGCATCTTCCAGCTCCTAACAATTTCATTCCAACTGACTTGTCACTTAAAGTTGTGCAAGAAAAGGTGAAGTTCCCAGTTTTGTTAAGGAGGTCAACTTATTCAGCTTTATGGTACAAGCCAGACACATTGTTTTCTACACCCAAGGCTTACGTTAAGATTGATTTCAATTGCCCATATGCTGGAAGCTCTCCTGAGGCTGAGGTTTTGGTGCATATTTTCACACAATTATTGATGGATTACTTGAATGACTATGCTTATTATGCTCAGGTTGCTGGTCTATATTATAGCATAACTCACACAGATGGTGGTTTCCAGGTGACACTCCTTGGTTATAATCACAAGTTAAGGATATTACTCGAAACAATAGTTGAGAAGATTGCAACATTTGAAGTGAAAACTGACAGGTTTTCTGTCATCAAGGAAATGGTAACCAAGGAATATCAGAATATGAAGTACCAACAACCTTATCAGCAGGCTATGTACTATTGCTCGTTGATCTTACAAGATCATACCTGGCCTTGGATAGAACAACTCGACTTGCTTCCTGCTCTTCAAGTTGAAGATGTTGCTAAATTTGTACCATTAATGCTCTCCAGGACATTTTTAGAGTTCTATATAGCAGGGAACATTGAAAGCCATGAAGCAGAGTCAATGGTCAAGCACGTAGAAAATGTTCTCTTTAATTATTCAACACCTCTGTGCAAACCTTTATTCTCATCTCAACATTTGGTGAATCGGGTTGTTAAACTTAAAAGTGGTATGAATTACTTCTACCCTTCAGAATGTCTTAATCCTGAAAATGAGAATTCTGCACTTCTGCACTATATACAGGTTGGTCGTGATGACTTTAAGCTGAATGTTAAACTTCAGCTTTTTGCTCTTGTTGCAAAGCAACCAACCTTTCATCAGCTACGATCGGTTGAGCAGCTGGGGTACATTACTGTGCTCTTGCAGAGGAATGATTGTGGTATACGTGGACTACAGTTTATTATCCAATCCACAGAAAAGTCTCCCGGGAACATTGAGCAAAGGGTCGAGGCATTTCTCAAAATGTTTGAGACCAAGATTTATAAGATGACAATTGATGAGTTCAAGAGTAATGTAAATGCTTTGATAGATGTGAAGCTAGAGAAACACAAAAATTTGAGGGAAGAATCATCATTTTTCTGGCGAGAGATTAACGATGGTACTTTGAGGTTTGATAGGAGAGAGCATGAGGTTGAAGCATTAAGGCAGCTCACTCTTCAAGAATTGATAGATTTCTTCAATGAATATGTGAAAGTTGGTGCAGCTCGAAAGAAAACTTTAAGTGTGCGAGTTCATGGGAACAGGCATTCATCTGAGTACAAAGCCGAAGTCTCAGAACCAAACTTTGCTAGAATAGATAATATATTTACATTTAGAAGATCACAGTCTCTTTATGGTTCATTTAAAGGACTTTCTGGGCAGATGAAATTATAG 2892 0.3959 MAVKDDVEIFKARIDKRDYRRVVLSNSLQVLLISDPVTDKCAASMNVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYISEHGGSTNAFTSSEHTNYYFEVNTDGFEEALDRFAQFFTKPLMSPDATMREIKAVDSENKKNLLSDAWRTNQLQKHLSDEGHPYHKFSTGNWDTLEVKPKARGLDTREELLKFYDENYSANLMHLVVYTNESLDEIQNLVEEKFQDIRNTNKSCFHPCGQPCKSEHLQIVVRTVPIKQGHKLRITWPVTPEIHHYTEGPSRYLGHLIGHEGEGSLYYILKKLGWATSLSAGESDWSLDFAFFSVVIDLTDSGHEHVEDIIGLLFKYIELLQHSGVCEWIFKELSAICETKFHYQDKIPPNDYVVDIASNMQFYPVKDWLTGSSLPFKFSPNVIHMVLGQLSPDNVRIFWVSKNFEGHTDKVEPWYGTGYSLEKITGSVIQGWMASAPNENLHLPAPNNFIPTDLSLKVVQEKVKFPVLLRRSTYSALWYKPDTLFSTPKAYVKIDFNCPYAGSSPEAEVLVHIFTQLLMDYLNDYAYYAQVAGLYYSITHTDGGFQVTLLGYNHKLRILLETIVEKIATFEVKTDRFSVIKEMVTKEYQNMKYQQPYQQAMYYCSLILQDHTWPWIEQLDLLPALQVEDVAKFVPLMLSRTFLEFYIAGNIESHEAESMVKHVENVLFNYSTPLCKPLFSSQHLVNRVVKLKSGMNYFYPSECLNPENENSALLHYIQVGRDDFKLNVKLQLFALVAKQPTFHQLRSVEQLGYITVLLQRNDCGIRGLQFIIQSTEKSPGNIEQRVEAFLKMFETKIYKMTIDEFKSNVNALIDVKLEKHKNLREESSFFWREINDGTLRFDRREHEVEALRQLTLQELIDFFNEYVKVGAARKKTLSVRVHGNRHSSEYKAEVSEPNFARIDNIFTFRRSQSLYGSFKGLSGQMKL* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0271 963 ProSitePatterns Insulinase family, zinc-binding region signature. 50 73 IPR001431 GO:0004222|GO:0006508
Vra3g0271 963 Gene3D - 498 724 - -
Vra3g0271 963 Gene3D - 725 958 - -
Vra3g0271 963 PANTHER ENZYME, PUTATIVE-RELATED 1 963 - -
Vra3g0271 963 SUPERFAMILY LuxS/MPP-like metallohydrolase 724 951 IPR011249 GO:0046872
Vra3g0271 963 Pfam Insulinase (Peptidase family M16) 30 165 IPR011765 -
Vra3g0271 963 SUPERFAMILY LuxS/MPP-like metallohydrolase 5 238 IPR011249 GO:0046872
Vra3g0271 963 SUPERFAMILY LuxS/MPP-like metallohydrolase 483 708 IPR011249 GO:0046872
Vra3g0271 963 PANTHER NARDILYSIN 1 963 - -
Vra3g0271 963 Pfam Peptidase M16 inactive domain 661 848 IPR007863 -
Vra3g0271 963 Pfam Peptidase M16 inactive domain 192 368 IPR007863 -
Vra3g0271 963 Gene3D - 244 469 - -
Vra3g0271 963 Pfam Middle or third domain of peptidase_M16 377 655 IPR032632 -
Vra3g0271 963 SUPERFAMILY LuxS/MPP-like metallohydrolase 246 482 IPR011249 GO:0046872
Vra3g0271 963 Gene3D - 2 238 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0271 K01408 - gmx:100804856 1771.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0271 3 3067967 3095118 Vra3g0271 3 3067967 3095118 ECH