Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0233 ATGAAAGAAATTGAGAAGAGAAAAGCTTCAAGAAATAGTCAGACAAAGGGTTCAAGAAAAACCGAAAGGAGAGAGAGTAAATTGCAACAAGATAATTCTTCAAAAAAATTGAGTGAGAGAGGAATTGAATCTAAGACACTCCATGATAGTAGACCAACTTCAAATAATACTATAAGTGATTCCAACACGGCCTCAGAGAATTCAGAAACTTATGAAAATGTGGTTATACATTACCTGGACGATGTCAACAGGTCTGAGGAGGCACTTGCCGAGATCAAAGTTAATAAAATGATTGCTAGTGAAAACAAAAATGAAGTGGCTGATGATCATTCTACTGATTTGGAGAAAGAGCAAAAGGAAGGGAATGACGAAGTATCAGATGCTGAGACAGTAAAGGATTCAGTATCTTCCCAAGGTGATTCTTTGACAAATGAGGATGAGAGAACCGAAGTGGCATCAAAAGATCCTAAAGGTAAGGTTAGAGTTAATCCTCCAGAAAACAACCGTGGTTCAAAGGAGAGATCTGATAAAAAAGCAAATAAATTGCAATCAAAGGTATCACATGGCAATCAAAAGAAACCTATGAACCCAAATAAAGGGCCCTCCACAGTGGTAGACAAAAATACTTCATCAACCAATTCTAAGACTTTGAAAGTTCCTGTAAATGTTTTGTTGGAATCTTCTGAAGGTGTTGATGAAAAGCCTGTTCAAGAGATCAAGGAACTTGATATTGTGGATGGATCCCCCAATGGTGCTCAGAACATAGGAATTGAACAAGAAAATCATGAAATGGTTAATGCTGAGGAAAATGATGAACATGGGGACGAGGCATCTGTGGAATTAAAAATTGAAGAAATGCAATTACGAATTGAAAAGCTTGAAGAGGAACTTAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCAGGACACAAGGTGCACACACCAGCTCGGCGCCTTTCTAGGCTCTATATACATGCTTGCAAGCATTGGACCCAAAAAAGGCGAGCGACAATTGCCAAGAATACTGTTTCTGGCCTCATTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATACCGTTGTACTGAGAGAGATAATTTTACAAGCTTTTGGGAATTCACGTCAAGCTAGTCCCCTTAAAAGGTTGGCCGAGTCAAATGGGTCTGGCAAGAGAAATGATGGGAAGTATACTGCACTGAAACGGAAGAGTAGCTCCAATGGTAAACCAGGAAGTGGTTTTATGCCTCTCGTTGAAGATTGGCAAGAGACAGGAACCTTTACCTTTGCTTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTATATGCAGTCTCCAGTTGGGGATTCTTCAAACAAATCTATTGGGAAGCTGATGGGACCTGCTCTGGGTGATCAAAATCAAGGAAATTTTTCCATCAATCTTTGGAGAAATGCTTTCCAAGATGCCTCTCAACGACTCTGTCCTGTTCGAGCAGGAGGACATGAGTGTGGTTGTTTGCCCGTATTGGCTAGAATGGTCATGGAACAATGCATAGCTAGACTAGACATTGCTATGTTCAATGCTATTCTTCGGGAGTCGGCCCTTGAGATCCCAACTGATCCTATATCAGACCCTATTGTGGATTCAAAGGTTTTGCCAATTCCAGCTGGGGATTTAAGCTTTGGTTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGTTGAAGATTGTGTACAAGAAGATCAGGAGGAGAAGGGTGAGAATGATGAAAAGCAGGGTGGGGCCGGTGAACCTAAGTCTTTTGTTCTCCTAAACGACTTGAGTGACCTTCTGATGCTGCCTAAAGACATGCTTATAGATAGAAAAATCAGACAGGAGGTGTGTCCTTCCATCAGTCTGTCATTGGTTATACGGATTCTCTGTAACTTCACTCCTGATGAGTTCTGTCCAGACTTTGTTCCAGGAACTGTCTTGGAGGCCCTGAACGCAGAGATAATTATAGAGCGAAGATTGTCATCAGAAGCTGGAAGAAGCTTCCCCTATGTAGCTGCTCCTGTTGTGTACAAGCCTCCCTCTTCTGGTAATGTGGCAGAGAAAGTTGCAGAGGCCGGAGGAAAGTCTCACTTGGGAAGAAATGTATCAGATGTTCAGAGAAGAGGATACACCAGTGATGAAGAGCTAGACGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTCATCTCCATCAGTCACTCATAATGGTAAAGGTAGTCACAAAGAACAAGGGACAAATTCTAGATACCAACTCCTACGTGAAGTTTGGTCCATGTGA 2424 0.4167 MKEIEKRKASRNSQTKGSRKTERRESKLQQDNSSKKLSERGIESKTLHDSRPTSNNTISDSNTASENSETYENVVIHYLDDVNRSEEALAEIKVNKMIASENKNEVADDHSTDLEKEQKEGNDEVSDAETVKDSVSSQGDSLTNEDERTEVASKDPKGKVRVNPPENNRGSKERSDKKANKLQSKVSHGNQKKPMNPNKGPSTVVDKNTSSTNSKTLKVPVNVLLESSEGVDEKPVQEIKELDIVDGSPNGAQNIGIEQENHEMVNAEENDEHGDEASVELKIEEMQLRIEKLEEELREVAALEVSLYSIVPEHGSSGHKVHTPARRLSRLYIHACKHWTQKRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTVVLREIILQAFGNSRQASPLKRLAESNGSGKRNDGKYTALKRKSSSNGKPGSGFMPLVEDWQETGTFTFALERVESWIFSRIVESVWWQALTPYMQSPVGDSSNKSIGKLMGPALGDQNQGNFSINLWRNAFQDASQRLCPVRAGGHECGCLPVLARMVMEQCIARLDIAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDCVQEDQEEKGENDEKQGGAGEPKSFVLLNDLSDLLMLPKDMLIDRKIRQEVCPSISLSLVIRILCNFTPDEFCPDFVPGTVLEALNAEIIIERRLSSEAGRSFPYVAAPVVYKPPSSGNVAEKVAEAGGKSHLGRNVSDVQRRGYTSDEELDELDSPLTSIIDKLPSSPSVTHNGKGSHKEQGTNSRYQLLREVWSM* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0233 807 MobiDBLite consensus disorder prediction 96 214 - -
Vra3g0233 807 MobiDBLite consensus disorder prediction 398 429 - -
Vra3g0233 807 MobiDBLite consensus disorder prediction 102 130 - -
Vra3g0233 807 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 806 IPR021827 GO:0005643
Vra3g0233 807 MobiDBLite consensus disorder prediction 143 183 - -
Vra3g0233 807 MobiDBLite consensus disorder prediction 184 214 - -
Vra3g0233 807 MobiDBLite consensus disorder prediction 1 47 - -
Vra3g0233 807 MobiDBLite consensus disorder prediction 48 70 - -
Vra3g0233 807 MobiDBLite consensus disorder prediction 773 798 - -
Vra3g0233 807 MobiDBLite consensus disorder prediction 1 70 - -
Vra3g0233 807 Coils Coil 276 303 - -
Vra3g0233 807 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 11 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0233 Vra-Chr3 2631235 2636594 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0233 - - pvu:PHAVU_001G137700g 1379.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0233 3 2631235 2636594 Vra3g0233 3 2631235 2636594 ECH