Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0203 ATGGAAGGGAGTGTGAATTGTCACCCATTGCTGAGAGGAGGTAGAAGAGAGAAAGGTTACAGCCATGGATTATCCTCTTCTCAGATGCATGTCATGTCTTCTATATGTCACGCCCTCTTTCCTTCTTTGCCATTCCAGGGAACTTCTCATCTCCCTTTTCCTCATGAGGCTGCAGAGCTTTTGCGCAAGAGGGTTGTGCCAGAAGCATTCTCCCTCGTGAGTTGGGTTCTCTGGATACTGTCCTTCAGATTGGGGACACTCTTTATCTGTGGAAGACTTTGCTTCAACTGGAAGTGGCCTTTCATCCACAACTTCTCTGAGATCACCTTGGATAAGAGAGAAGAGATTCTCAGGAACTGGTCCAGGGAGAAGCGTTGGGTGCCCCTGCGGATAGTCTTTTTGCTCATCAAACTTGCTTTCTTCTACACTTTCTTCTCAAGGGCTGATGAAAATGGACATAATCCCGCATGGGAAGCAATTGGATACGAGGTGGACACGAAGGAAAAGTTGGTACAGAAGGAGAGGCCTCTGCAAAGGGGATTAATAGAGACTATGTATGAAACTGATTCTACTTTGATGCAATCCCTCACTGAAAAAGGCCTTGAAGTTACTGAAGATAAACTGCAGAACCTATACAAGGTCAAATGTGATGTTGTCATTGTAGGATCTGGTTGTGGTGGTGGAGTTGCAGCTGCAGTTCTTGCAAACTCTGGTCAGAAAGTAATCGTCCTAGAGAAAGGAGAGTATTTTGTTTCCCATGATTATTCTTCCCTGGAAGGACCATCCATGAACGAGCTATACGAATCAGGTGGCATTCTGCCAAGTCTTGATGGGAAGATGATGATCCTAGCTGGCTCAACTGTGGGTGGAGGCTCTGCTGTAAACTGGTCTGCATGCATCAGAACACCCGATTCTGTTCTGAGGGAATGGTCGAAAAAAAATAAAATTCCACTTTTTGCAAGCTCTGATTATCAATCTGCCATGGACACGGTATGCAGAAGGATTGGTGTGACAGAGAAGTGCAAGAAACATGGGTTTCAGAATCAAATTCTCATACAAGGATGTGAGAAAATGGGCTTGAAAGTAGAGTCAGTGGCTACAAATTCCTCAGAAGATCATTATTGTGGTTCATGCTGTTATGGTTGTAGAAGAGGAGATAAGAAGGGCACTGAGTCTACTTGGTTGGTTGACGCTGTAGGAAATGGTGCAGTGATCCTCTCAGGATGTAAAGCTGAAAGATTCATACTTGAAGATGGGAATGGTGGAATGAAGAAAATGAAATGTTCAGGAGTTATTGCAGCAGCAACATGGAGGAGTAAGGTAACAAAGAAACTCCTAATCGAATCCAAGGTAACTATTTCAGCATGTGGCAGTCTGTCCACTCCTCCTCTAATGATTTCCAGTGGACTGAAAAATCCAAACATTGGAAGGAATCTCCATCTCCACCCAGTTCTATTTGCATGGGGATACTTCCCAGAAGACATGACAAACTTCAGTGGCAATAACTACGAGGGTGGGATCATAACTTCGATCCACAAGGTATTTGCAGAAGATTCCACCCCAAGATTCATCATAGAAACACCTGCGGTAGGACCAGGATCATTTTCAGCATTGGCTCCCTGGCTTTCAGGGCATGACATGAAAGACAGGATGGAAAAGTATGGAAGAACTGCTAACATTTTTGCCTTGATTAGAGACCGTGGTTCAGGAGAAGTGAAGGCTGAAGGGAGAATAACTTACAGACTTGAGCAAGAGGACAAAGAAAACCTTAGAATTGGACTAAGGAAGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTATGGAAGTTGGCACATTCAGGAGTGATGGGCAAAGACTGAAATGTAAGGGGATGAAGGAGGAAGATTTAGAGGAGTTTCTTGACACTGTGACAATAGTTGGGGGTCCAAGGTCCAGGAATGAACTCTGGACAGTGTTTACATCTGCACATCAGATGACAAGTTGTAGAATGGGTGCTACTGAAGAAGAAGGTGCAGTTGATGAAAATGGTGAGAGTTGGGAAGCAAAAGGCTTGTATGTGTGTGATGGAAGTGTTTTGCCCACTGCAGTTGGTGTCAATCCCATGGTAACCATTCAGTCAACAGCATACTGCATTGCCAACAAAATTGCAGAATCTCTTACCATAATTGCTTAA 2172 0.4429 MEGSVNCHPLLRGGRREKGYSHGLSSSQMHVMSSICHALFPSLPFQGTSHLPFPHEAAELLRKRVVPEAFSLVSWVLWILSFRLGTLFICGRLCFNWKWPFIHNFSEITLDKREEILRNWSREKRWVPLRIVFLLIKLAFFYTFFSRADENGHNPAWEAIGYEVDTKEKLVQKERPLQRGLIETMYETDSTLMQSLTEKGLEVTEDKLQNLYKVKCDVVIVGSGCGGGVAAAVLANSGQKVIVLEKGEYFVSHDYSSLEGPSMNELYESGGILPSLDGKMMILAGSTVGGGSAVNWSACIRTPDSVLREWSKKNKIPLFASSDYQSAMDTVCRRIGVTEKCKKHGFQNQILIQGCEKMGLKVESVATNSSEDHYCGSCCYGCRRGDKKGTESTWLVDAVGNGAVILSGCKAERFILEDGNGGMKKMKCSGVIAAATWRSKVTKKLLIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVLFAWGYFPEDMTNFSGNNYEGGIITSIHKVFAEDSTPRFIIETPAVGPGSFSALAPWLSGHDMKDRMEKYGRTANIFALIRDRGSGEVKAEGRITYRLEQEDKENLRIGLRKALRILVAAGAMEVGTFRSDGQRLKCKGMKEEDLEEFLDTVTIVGGPRSRNELWTVFTSAHQMTSCRMGATEEEGAVDENGESWEAKGLYVCDGSVLPTAVGVNPMVTIQSTAYCIANKIAESLTIIA* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0203 723 Pfam GMC oxidoreductase 577 710 IPR007867 GO:0016614
Vra3g0203 723 Gene3D - 564 718 IPR036188 -
Vra3g0203 723 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 5 720 - -
Vra3g0203 723 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 5 720 - -
Vra3g0203 723 PIRSF Lg_Ch_AO 10 722 IPR012400 GO:0046577
Vra3g0203 723 Pfam GMC oxidoreductase 217 484 IPR000172 GO:0016614|GO:0050660
Vra3g0203 723 Gene3D - 201 512 IPR036188 -
Vra3g0203 723 SUPERFAMILY FAD/NAD(P)-binding domain 215 719 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0203 Vra-Chr3 2355376 2358859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0203 8 719 Acyl Lipid Metabolism Gene Families AT4G28570 58.527 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0203 K17756 - gmx:100808951 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0203 3 2355376 2358859 Vra3g0203 3 2355376 2358859 ECH