Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0195 ATGGCCAGATACCTAGGAGGATTACTGGCACTGCTTTTTTCTGCTTCGATCTGCGGAGCCGTCACGATTCCTGGCCCCATCTCTGATGCTCACCGTTCCGTAGCATTGGAGCTCTTCGGTGGCTCATTTTCAAGCTTAGAAGAGGCCTATGAGGCTCTCAGAGTTTTTGAGATTCTTGGGATTGGGAATAAGCCAGATGTGAGCGCAACCACGTGCAAGCAAGTANTGGAAAATCTTGGGTCCTCGTCCCCTGTGAAGGATTTGTTCTATGCATTAAAGGTTAATGGCATATTAAAGTGCAAGGTTAATGCGGACGTTTTCAAGGATATTGCTGTGAGAGTTAAAGCCACTGTCAATGATGCAAGCACTTTGGTTGACATGTACCANTCAATAGCAAGTTTGGTTCTCATNAAGGATCAGGCTTCTGATGTTGATGTGCTTCTTGCCGATGCGGATGGAATCTTCCATTCAATCAAGGCTCTGAGCCAAAGTGATGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCCAGTACCTTTGCCGCTGGGTTAGCACTTGAAGCACTGGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCTGTCTAGGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGATGACGGAACCTTCTACTTTGATGAGAAATTTGTTGGTGGACGTGAGCATCAGGGTTCTCTTTCCACAACTTCATCTGTTGTTCGAGGGGTTACAACATTTGCTTCTGTAATTTCTGGAAAAGTAAATCTTCCAGGGGATAAAGTTTTGGGTTTAGCAAAATTTTTCCTGGGTATTGGAATCCCAGGTGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTGGCTCTTCTAGAGAACAACAGGGTTTCCATCCCATTGGTATTGTCACTTCCTGAAACAGTTTATTCATTATCCAAAAAAGATCAGCTCAAGGTTAGGGTGAATACAGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGATTGTCCGAGCTTTCCGCTCTGATGCTAAAGATTCAGCTATTTTTGAGAGCAAGGAGCTCCAATATGATGAAAGTAATGGAATTCATGTCTTGGAAGTTTTCCCAGACCATGTGGATGTGGGAACTTACGTGTTTGTTTTTGAGATTGTACTTCACGATTCTGCTGGTGAAAATGTTTTTGCTACTGGAGGTCAAATTCATGTACCAATATATGTCACTGGCATTATCAAAGTCAGCAATGCAGAAATTGCAGTTGTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAAAGCTAGATTTGGATGGAAATGTTGTTGTTGAACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAATTGACAACACCTCATGGTCATGCTTTTAAGCCTCATCAGGCACTTTTGAAGTTGAAGCATGAGACAAAACATGAACACGTCTTTGTGGTTGGAAATACTGGCAAGAAGTTTGAGATCGTTCTTGATTTTCTTGGTTTGGTGGAAAAGTTTTATTATCTCTCGGGCAGATATGACATTGAACTGACCGTTGGAGATGCTGTTATGGAGAACTCTTTCTTGCGACCTCTTGGTCACGTTGATTTAGAACTTCCAGAAACTCCTGAGAAGGCAGTGCGTCTTCCTCCCCTCCCTGTTGATCCTTACTCAAGATATGGTCCCAAAGCTGAGATAGCCCACATATTCAGGGCTCCTGAAAAACGACCACCCCAGAACCTCTCTCTTACTTTCTTGAGTTTGACTCTTCTTCCATTTATTGGCTTTTTAGTTGGGCTGTTACGCTTGGGGGTGAACTTTAAAAATTTTCCATCTTCAGCAGCACCTGCCACATACGCTATCCTATTCCATCTCGGCATTGCTGCAGTTCTATTGCTCTATGTACTTTTCTGGTTGAAGCTGGACTTGTTTACTACACTCAAAACTGTAGGACTTTTGGGTGTTTTTCTTATGTTCGTGGGACACAGAATTCTCTCCCATCTCGCTTCAACTTCATCCAAGTTGAAGTCTGCATGA 2067 0.4248 MARYLGGLLALLFSASICGAVTIPGPISDAHRSVALELFGGSFSSLEEAYEALRVFEILGIGNKPDVSATTCKQVXENLGSSSPVKDLFYALKVNGILKCKVNADVFKDIAVRVKATVNDASTLVDMYXSIASLVLXKDQASDVDVLLADADGIFHSIKALSQSDGRWRYSSDNPESSTFAAGLALEALAGVISLASSEIDLSRVNTVKNDILKLFDSIEKYDDGTFYFDEKFVGGREHQGSLSTTSSVVRGVTTFASVISGKVNLPGDKVLGLAKFFLGIGIPGDAKDFFNQVESLALLENNRVSIPLVLSLPETVYSLSKKDQLKVRVNTVLGSAAPPLTVKIVRAFRSDAKDSAIFESKELQYDESNGIHVLEVFPDHVDVGTYVFVFEIVLHDSAGENVFATGGQIHVPIYVTGIIKVSNAEIAVVDSDLGSVETQKKLDLDGNVVVELSANHLQKLRFSFQLTTPHGHAFKPHQALLKLKHETKHEHVFVVGNTGKKFEIVLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHVDLELPETPEKAVRLPPLPVDPYSRYGPKAEIAHIFRAPEKRPPQNLSLTFLSLTLLPFIGFLVGLLRLGVNFKNFPSSAAPATYAILFHLGIAAVLLLYVLFWLKLDLFTTLKTVGLLGVFLMFVGHRILSHLASTSSKLKSA* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0195 688 Pfam Oligosaccharyltransferase subunit Ribophorin II 9 680 IPR008814 GO:0006487|GO:0008250|GO:0016021
Vra3g0195 688 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 1 688 - -
Vra3g0195 688 PANTHER RIBOPHORIN II 1 688 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0195 Vra-Chr3 2286779 2295612 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0195 K12667 - gmx:100780415 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0195 3 2286779 2295612 Vra3g0195 3 2286779 2295612 ECH