Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0191 ATGGGTTCTCTTCCTTTGCCGGCATTCCCAGCCGCGGCGGCGAAACATAGCCTTGACGAGAGCAGCCACATTGACGAGAGCGCCCTCACGACGCTGTTCAAGTCCCAGCAGAGCCACCTCAACTTCTTCTTCGAACACATAGACCACTCCCAAACCCTAGCCTTCACGCGCGCTCTCCTTAACGCCGCAGGCACCGTCTTCTTCACTGGCGTCGGCAAGTCCGGCTTCGTCGCCCACAAGATCTCGCAGACGCTCGTATCGCTCGGCATCCGCTCCGCCTTTCTGTCGCCGGTCGACGCGCTCCACGGTGACATCGGGATCCTCACCGACCGTGACGTTCTCGTACTCCTCAGCAAGTCAGGCGCCACCGAGGAGCTCCTCCGCCTGGTGCCTTGCGCGAGGGCGAAGGGCGCACTCCTCATCGCGCTCACCTCCGTCGAAGGTAACGCGCTGGCTGCGGCGTGCGACATGGCCGTGCATTTGCCTCTTCAGAGAGAGCTCTGTCCGTTCAACCTTGCGCCGGTCACATCCACCGCCATTCAGATGGTTTTCGGGGACACTGTGGCCATCGCGCTCATGGAGGCAAGGAATCTCACCAAGGAGGAGTACGCTGCGAACCATCCCGCCGGCAAGATCGGGAAGAGTCTCATCTTCAAGGTAAAGGATGTGATGAGGAAACAGGACGACCTTCCGATTTGCAGAGAAACGGATTTGATTATGGATCAGCTTGTGGAACTGACGAGCAAAGGATGCGGATGCCTCCTTGTGATCGATGACCGGTACCGTCTGATCGGAACGTTCACCGACGGTGATCTTCGTCGCACTCTCCGAGCCAGCGGGGAAGCCATTTTCAAACTCACTGTGGGGAGGATGTGCAACAGGAATCCAAGAATTATTGGCCCGGAGGCTATGGCGGTGGAGGCGATGAAGAAAATGGAAGCACCTCCGTCGCCTGTTCAGTTTTTGCCTGTGATAAACGATGAGAATATTTTAATTGGGATTGTGACCTTGCATGGATTGGTTTCTGCTGGGTTGTGA 1038 0.5723 MGSLPLPAFPAAAAKHSLDESSHIDESALTTLFKSQQSHLNFFFEHIDHSQTLAFTRALLNAAGTVFFTGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTDRDVLVLLSKSGATEELLRLVPCARAKGALLIALTSVEGNALAAACDMAVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLTKEEYAANHPAGKIGKSLIFKVKDVMRKQDDLPICRETDLIMDQLVELTSKGCGCLLVIDDRYRLIGTFTDGDLRRTLRASGEAIFKLTVGRMCNRNPRIIGPEAMAVEAMKKMEAPPSPVQFLPVINDENILIGIVTLHGLVSAGL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0191 345 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 64 335 IPR004800 GO:0005975|GO:0016853
Vra3g0191 345 Pfam CBS domain 288 343 IPR000644 -
Vra3g0191 345 Pfam CBS domain 220 276 IPR000644 -
Vra3g0191 345 ProSiteProfiles CBS domain profile. 224 283 IPR000644 -
Vra3g0191 345 Gene3D - 24 214 - -
Vra3g0191 345 Pfam SIS domain 60 190 IPR001347 GO:0097367|GO:1901135
Vra3g0191 345 ProSiteProfiles SIS domain profile. 55 198 IPR001347 GO:0097367|GO:1901135
Vra3g0191 345 ProSiteProfiles CBS domain profile. 292 345 IPR000644 -
Vra3g0191 345 CDD CBS_pair_SIS_assoc 216 341 - -
Vra3g0191 345 PIRSF KdsD_KpsF 13 345 IPR004800 GO:0005975|GO:0016853
Vra3g0191 345 Gene3D - 215 343 IPR046342 -
Vra3g0191 345 CDD SIS_Kpsf 64 191 IPR035474 -
Vra3g0191 345 PANTHER - 1 345 - -
Vra3g0191 345 SUPERFAMILY SIS domain 38 344 IPR046348 GO:0097367|GO:1901135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0191 K06041 - gmx:100805755 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0191 3 2227768 2229489 Vra3g0191 3 2227768 2229489 ECH