Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0187 ATGAAATCCTGCATAAGCCTAAAACTAAGGCTAAGGCTTCCACCAGCTAAAAAGGCATGGAAGAGCTTCACTTCTACAATTGGTAAACTCAGTAAGTCCAAATCCAAAACCATGAAGAAACCTAGAAAGCTTTCAAAACCTACCACCAAATTTGCTACCTCCAAGCGTTTTTTTCGCCACAAAAGGTTACGCACAGTCAGAAGTTTGCTCTTGGGGTTCCACAAGAAGCCTGCGCCTGTGTACATTGATAAGCTCTTCAAAGAGCCTTCATGTGACTTGGTGGGGCAGTTGAAGCCACCGACAGCATACAAATCACGAACTAAAAGGCTGTCTGGAGAAGAAGGAACAACAAAGGGTGGTAGATCTTGCGGCTCAGATGACATGTGGGAGTCACTGGCGTTGGCATCACCTCAGATGCAGGGAATAGATGAACGAGCAGAGGAGTTCATCACTAGATTCAGACAAGAGATGGCAGCGCAAGAGATGATAGCAAGAAATTTTTAG 504 0.4504 MKSCISLKLRLRLPPAKKAWKSFTSTIGKLSKSKSKTMKKPRKLSKPTTKFATSKRFFRHKRLRTVRSLLLGFHKKPAPVYIDKLFKEPSCDLVGQLKPPTAYKSRTKRLSGEEGTTKGGRSCGSDDMWESLALASPQMQGIDERAEEFITRFRQEMAAQEMIARNF* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0187 167 Pfam Cotton fibre expressed protein 141 160 IPR008480 -
Vra3g0187 167 PANTHER COTTON FIBER (DUF761) 3 166 - -
Vra3g0187 167 PANTHER DUF761 DOMAIN PROTEIN 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0187 Vra-Chr3 2171398 2172581 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0187 - - gmx:100776152 236.884