Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0185 ATGGATATGGAGAAGAAAGAGGGTGAAGCCTCCCTGTTGTGGTTCGAAACCTCGGACTCTGTTTGTCGCCGACACCAGTTTGAACCCGATGGTCGACTGTCCGCTGTGATTGTTGGTGATTCCAGGCCCTTCTACCAAAGGGTGGTTGGAGCTTTCATGAATAAATTTTATCCCTCGGGATATCCATACAGTGTGAATGAAGGCTACCTTAGATACACACAGTTTCGAGCCCTGCAACATGTTACCAGGGCAGCGCTATCGGTGCTATCAACTCAGTCCTTACTATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCGACAGCTGTTAGTTGGATTTTGAAGGATGGAATGCAACATGTGGGGAAGGTGATCTGTAGCAATTGGGGTGCTAGAATGGATTCTGAGCCTAAACGTTGGAGACTGCTAGGTTTGCATGTGGGCTGCTTTATACTTTTTGCAGCTGATGTTCTCTATGATATAGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCACATCTTTTTCTTGAAGTGGCAGGCTTAGGAAATTTTGCAAAGGGGATAGCAGTTGTTGCAGCAAGAGCAACAAGGTTGCCCATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGCGACCTATTTGCTAAAGGAGAGGCTTTCTCAACTCTCTTTACTGTTATAGGAATTGGAGTTGGAATTCAATTAGCATCTACTATCTGCGCATCAATGCAGGGAAAGTTGGTTGCGGGTCCTCTCCTTTCAATTATACATTTATACAGCGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACCTTGAATCCACGAAGAACTGCAATGGTGGTGGATGATTTTCTCAAGGCAGGAGTTGTATCAAGCCCTTCTGATCTAAGATATAGGGAAAATTTGCTGTTTAATCTGCAACTCAAAGAAGATACGGGAAATGTAAAAGTGGGGAAGGCTATGCACAAGACCATTAAGCCTTCCAGGCTTCTTGAATTGAAACAAGTGTTCCATGAGGAGAAGTTTCTTTTAAACTTAGGGAATAAAGGCGTTGACATGGTATTGGAGCAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAGTTGTGAGTTCCTCTCGTCATGAGCTCAGTGCTAGTGTCATGCACGAGGCTTATCATAAAATGAATGGTGTGTTTCCTATATTCTTGAAAGAATTACAGAACAAAGGGTGGCACACTGATCGGTTTTTGGATGGAACTGGGAGCCGTTTTGCATTATAA 1293 0.4416 MDMEKKEGEASLLWFETSDSVCRRHQFEPDGRLSAVIVGDSRPFYQRVVGAFMNKFYPSGYPYSVNEGYLRYTQFRALQHVTRAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKVICSNWGARMDSEPKRWRLLGLHVGCFILFAADVLYDIGIGLEVLSPLCPHLFLEVAGLGNFAKGIAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFTVIGIGVGIQLASTICASMQGKLVAGPLLSIIHLYSVSEEMRATPINTLNPRRTAMVVDDFLKAGVVSSPSDLRYRENLLFNLQLKEDTGNVKVGKAMHKTIKPSRLLELKQVFHEEKFLLNLGNKGVDMVLEQDASGEDALRGWLVAAYAAQVVSSSRHELSASVMHEAYHKMNGVFPIFLKELQNKGWHTDRFLDGTGSRFAL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0185 430 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 5 429 - -
Vra3g0185 430 PANTHER RUS1 FAMILY PROTEIN C16ORF58 5 429 IPR006968 -
Vra3g0185 430 Pfam Vitamin B6 photo-protection and homoeostasis 47 289 IPR006968 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0185 - - gmx:100804154 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0185 3 2143701 2147407 Vra3g0185 3 2143701 2147407 ECH