Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0184 ATGTCTTTCAGAGGCCTAAGCAGGCCAAATGCTCCATCAGGCATGGGTGTTGCTGATCACAGCAAAACCACCTTCATGGAACTGAAGCAGAAGAAGGTCCATCGCTATGTGATCTTTAAGGTTGATGAGAAGAAAAGGGAGGTTGTGGTTGAGAAGACCGGTGGNCCCGCTGAGAGCTATGATGATTTCGCTGCATCTTTGCCTGAGAATGATTGCAGATATGCCGTCTTTGACTTCGATTTCGTCACTTCTGAGAATTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCTCCTTCAACTTCTCGGATTCGAGCCAAGATGCTCTACGCCACAACTAAAGACAGATTCTACTAG 357 0.4566 MSFRGLSRPNAPSGMGVADHSKTTFMELKQKKVHRYVIFKVDEKKREVVVEKTGGPAESYDDFAASLPENDCRYAVFDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATTKDRFY* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0184 118 Gene3D Severin 11 118 IPR029006 -
Vra3g0184 118 Pfam Cofilin/tropomyosin-type actin-binding protein 22 117 IPR002108 GO:0003779
Vra3g0184 118 PANTHER COFILIN-RELATED 1 117 IPR017904 GO:0015629|GO:0030042
Vra3g0184 118 SMART adf_2 19 117 IPR002108 GO:0003779
Vra3g0184 118 CDD ADF_cofilin_like 13 117 IPR017904 GO:0015629|GO:0030042
Vra3g0184 118 SUPERFAMILY Actin depolymerizing proteins 11 117 - -
Vra3g0184 118 ProSiteProfiles ADF-H domain profile. 14 118 IPR002108 GO:0003779
Vra3g0184 118 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0184 Vra-Chr3 2137720 2139479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0184 K05765 - gmx:100819975 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0184 3 2137720 2139479 Vra3g0184 3 2137720 2139479 ECH