Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0174 ATGGCGTTCTCTTCGTTTCTCGGCAGAGTCCTCTTTGCGTCCGTTTTCATCCTCTCTGCTTACCAAGAATTTAATGCTTATGGGATTGATGGCGGACCCGCAGCAAAAGCACTGAGACCGAAGTTTGATGCATTTGCCCATCAAGTACATTCTAGAGTTGGATTTCAACTTCCGGATATCGATATGAAGTTTTTAGTTGCTGGGGCTATTGCTCTCAAGGGCATCGGAGGGATTCTTTTCATACTTGGCAGCTCTTTTGGAGCTTTCCTTTTGCTTTTGCATCAATTGATTACTACTCCTATACTGTATGATTTCTACAATTATGACAGCGAGGACAAAGAATTTATTCAACTTTTCATCAAATTTACTCAGAATATGGCCCTCTTCGGGGCTTTGTTGTTTTTCGTTGGGATGAAAAACTCCATTCCTAGAAGGCAACCCAAGAAGAAGGCTCCCAAAACAAAAACTTATTAG 474 0.4156 MAFSSFLGRVLFASVFILSAYQEFNAYGIDGGPAAKALRPKFDAFAHQVHSRVGFQLPDIDMKFLVAGAIALKGIGGILFILGSSFGAFLLLLHQLITTPILYDFYNYDSEDKEFIQLFIKFTQNMALFGALLFFVGMKNSIPRRQPKKKAPKTKTY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0174 157 PANTHER HR-LIKE LESION-INDUCING PROTEIN 1 157 - -
Vra3g0174 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Vra3g0174 157 PANTHER - 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0174 Vra-Chr3 2005256 2008502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0174 - - gmx:100817488 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0174 3 2005256 2008502 Vra8g0090 8 947457 949506 PCT