Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0167 ATGAATTCCGTCTGTGATGGTGGCGCCACCGTAATCCCGGGTCTCCCAAACGACGTCGCGGCGTGGATCCTCTCCAAGGTGCCATACTCGCACCACGCCAGACTGAAAAGCACTTGCAAATCATGGAAACTGCTTTTGTCTTCGAGATCGTTCCTAAACTCTTTGAATAAGAGAAACCATCTTCTCTGCATCTTCCCGCAGGACCCATCGATCGCGTCGCCGTTCCTCTTCGACCCAAACGCGCTCGCCTGGTGCCCTCTCCCTCCCATGCCCTGCAACCCCCACGTGTACGGCCTCTGCAACTTCGCCGCGGTGCCTCTTGGGCCCCACCTTTACGTCCTCGGGGGCTCCCTCTTCGACACGCGCTCCTTCCCAATCGATCGTCCCTCGCCCTCCTCGGCCACCTTCCGCTTCAACTTCCACGACTTCTCCTGGGAGCCACGCGCCCCCATGCTCACCCCGCGGGGCAGTTTCGCCTGCGCCGTTGTCCAGGGGCGTATTCTTGTCGCCGGCGGGGGGTCGCGGCATACGATGTTTGGGGCTGCTGGGACTAGGATTCGGTCGGTTGAGCGGTACGAGGTGGGGAGGGACCGGTGGGTGGCGATGGATCCGCTGCCCGGGTTTCGGGCCGGGTGTGTGGGATTTGTTGGCGGGGAGGGGAGGGAGTTCTGGGTGGTGGGAGGGTACGGCGCGTCGCGGACCATATCCGGGGTTTTTCCGGTGGATGAGTATTACAGGGATGCAGTGGTGATGGCTGTTGAGGGTGGAGCGTGGCGGGAGGTTGGGGATGTGTGGGGGGATGGGGAGAGAGTGAGGATTGGGAAGATTGTGGTGGTGGATGATGATGGATGTCCCACGCTTTTCATGCTTGATGGGAACGAGATTTTGAGATATGACATGTGTTGCAATCGTTGGGTATACGAGTGTCGTGTGCCAAGAAAAGCTCCTTACAATTCGTCATTTGGTTTTGTAGTATTAGCGGGGGAGCTGTATGTAGTGACACACTTATGTGTTGTTGATTTTTCAGAAACTCGAAGGTCCAGACAGCAAAAGAGGGCAGGAACAATGTTCATTCAAATCTATCACCCAAAAAATAAGACGTGGAGATCGCTAGTTTCCAAATCACCTTTCAATTATCCAATAGATATTAATAGTGCTGTATTCAGCTCAATTTCTCTATGA 1182 0.5558 MNSVCDGGATVIPGLPNDVAAWILSKVPYSHHARLKSTCKSWKLLLSSRSFLNSLNKRNHLLCIFPQDPSIASPFLFDPNALAWCPLPPMPCNPHVYGLCNFAAVPLGPHLYVLGGSLFDTRSFPIDRPSPSSATFRFNFHDFSWEPRAPMLTPRGSFACAVVQGRILVAGGGSRHTMFGAAGTRIRSVERYEVGRDRWVAMDPLPGFRAGCVGFVGGEGREFWVVGGYGASRTISGVFPVDEYYRDAVVMAVEGGAWREVGDVWGDGERVRIGKIVVVDDDGCPTLFMLDGNEILRYDMCCNRWVYECRVPRKAPYNSSFGFVVLAGELYVVTHLCVVDFSETRRSRQQKRAGTMFIQIYHPKNKTWRSLVSKSPFNYPIDINSAVFSSISL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0167 393 Gene3D - 56 379 IPR015915 GO:0005515
Vra3g0167 393 SUPERFAMILY F-box domain 10 68 IPR036047 GO:0005515
Vra3g0167 393 SMART kelc_smart 110 165 IPR006652 GO:0005515
Vra3g0167 393 SMART kelc_smart 166 218 IPR006652 GO:0005515
Vra3g0167 393 SUPERFAMILY Kelch motif 66 372 IPR015915 GO:0005515
Vra3g0167 393 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 7 393 - -
Vra3g0167 393 Pfam Kelch motif 154 206 IPR006652 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0167 - - gmx:100820159 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0167 3 1929844 1933687 Vra3g0167 3 1929844 1933687 ECH