Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0160 ATGTCATCCACGTCTTCCTCCACGCCACATTACAGTTCTTTCCCCTCGCCCTCATCGTCATCCACCGCCACTCATCCTTACTTTATCACACGCGCTGCCACATCCGCACGCCCCGCTTTTGCCACGCGCAGGCCATGGGAAGAGGTATTCGCGCTCTACTCTTTCACGCCTCCCCACTCCATCAACGAAGCCACCATGCGCGTGAAGCGCAACCTCAACCACTTCCGCGTGAACTACTTCATGATGGTGCTGTTTGTTCTCTTTCTCAGCCTCCTCTGGCACCCGCTCTCGATAATCGTGTTTTTGGTGGCGCTGGTCGCTTGGTTCTTTCTCTACTTCTTCCGGGACGAGCCGGTGGTGGTGTTCGGCTCCTCGGTGGATGATAGGACGGTGGCGGCTGTCCTTGCGGCAGCGACTGTCGTGGCCTTGGTGTTCACCGGCGTGTGGGTGAACGTGGTGGTTTCGATTGTCGTCGGGATTGCGCTGGTGGTATTGCACGCTGGTTTTAGGAGCAGTGAAGATTTATACATGGATGAACACGAGGGTTACGACGGTGGGTTACTTTCGGTGGTTGGGGGTACCCCTACAAAACGAACGGGAGGGTACACTTAG 612 0.5637 MSSTSSSTPHYSSFPSPSSSSTATHPYFITRAATSARPAFATRRPWEEVFALYSFTPPHSINEATMRVKRNLNHFRVNYFMMVLFVLFLSLLWHPLSIIVFLVALVAWFFLYFFRDEPVVVFGSSVDDRTVAAVLAAATVVALVFTGVWVNVVVSIVVGIALVVLHAGFRSSEDLYMDEHEGYDGGLLSVVGGTPTKRTGGYT* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0160 203 MobiDBLite consensus disorder prediction 1 22 - -
Vra3g0160 203 PANTHER PRA1 FAMILY PROTEIN 21 196 - -
Vra3g0160 203 Pfam PRA1 family protein 40 179 IPR004895 -
Vra3g0160 203 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 21 196 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0160 Vra-Chr3 1804711 1806683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0160 K20359 - gmx:100794255 253.062