Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0157 ATGAAGTCATCGCGTTGGTGGCAGAGGACTCTGATCCTCGCTCTTCTCTCTGTCTCCGTCGTTGCTCCGGTCTTCTTCGTCTATCACCGCCTCAATCTCTCTCCCTACGCAAGACGAGAGTTTCAAGAAGATATATCCAGTGTTACATTTAGGACAGATCCTTTACAGCTAAATGCTATTGGACAGGAAGGTGTTGAAGAATTGGAAGAGCCAAAAGAAGTTGTTTATAAAGAAAAAGATTTTGGTTCAACAAATAGTTCCATACAACAAAAGATTAATGATTGTGAGAAATCTAAAATCCAAGGGTGTAGAAATAACATTTTGGAAAGAAATGAATTTAACCAGGACACAAGGCAGGACCTGAAAGCTCAGCAGAAAGAATTATTCTCCATCGTTGAGGATGAGAACATATTTAATACAACAGTCACACATAACCAGAGCATGCACACTCATTCTAAAAAAACGGCAGATGCTAATGTTGAAGTGAAAGATAAGAAATCTATGCCGAGAGCAACCCAAAATCATCAGAGTTCACGTCCTCAGCCTCGGAGAGTGTTAAATCAGAAGGTTTTAGAAATTAAGGATCAAATTATTAGAGCCCGAGCATACTTGGGTTTTGCTTCACCAGGCAGCAGCTCACGCTTGATGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAACGTGCACTTGGAACAGCTACTAAGGATTCAGAGCTGTCTAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGCAGACCGTGCTTTCCCAGACTGCACTGCTATGGCAACTAAGCTCCGTGCAATGAACCAGAAGACTGAAGGGGAAATTCGTTATCAACAACGTGAAACAACATATCTTGTTCATCTTGCTGCAAGGACTACCCCGAGAGGTGTTCACTGTCTTTCCATGCAGCTAACTGCTGATTACTTTGCCCTGAGACCTGAGTACAGGAAGCTTCCAAATGAAAATAAGATTAATGATCCAAAACTTCATCATTATGTTGTCTTCTCTGACAATGTTCTGGCGTGTGCAGTTGTTGTTAACTCTACTATCTCTAATGCCAAGAAACAGGGGAAACTTGTTTTCCATGTAGTGACCAATTCACTAAACTTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGCAAAGCCACAGTCCACATACAAAGCATAGAGAACTTTGAATGGTTGCTCAAGTACAATACATTCAAAGAACAAAATTCCAGTGATCCAAGATTTACTTCTGAGTTGAACTACCTGCGTTTCTACCTTCCAGATATCTTCCCTACTTTAAATAAGGTTGTGCTCTTTGATCATGATGTCGTGGTGCAACAAGATCTCAGTAGGCTATGGAATGTTAATATGAAAGGGAAAGTAAATGCAGCAGTTGGCACTTGTCAGGAAGGGGAAACTTCATTTCATAGGATGGATACGTTCATAAACTTCTCAGATCCATTCATTGCAAATAGGTTTGATGTCAATGCTTGCACTTGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGAAGACAAAATTTAACTGCTCTCTATCACAGTTATTTGCAAATGGGTTCCGAGAGGCCATTGTTGAAAACTGGAAGTCTGCCTTTAGGGTGGCTGACCTTCTATAACAAGACTATGATTTTGGACAAACGGTGGCAGATTCTTGGTCTTGGTTATGACTCAGATGTTGATAAAAACCAGATTGAGTGGGCTGCGGTTATACACTTCGATGGAATTAGGAAACCGTGGTTAGACATTGCAATGGGAAGATATAGAAGTTACTGGACCAAATTTGTGGAGTTTGACCACCCTATCTTGCAACGTTGCAATCTCCAGGCGTAG 1875 0.4123 MKSSRWWQRTLILALLSVSVVAPVFFVYHRLNLSPYARREFQEDISSVTFRTDPLQLNAIGQEGVEELEEPKEVVYKEKDFGSTNSSIQQKINDCEKSKIQGCRNNILERNEFNQDTRQDLKAQQKELFSIVEDENIFNTTVTHNQSMHTHSKKTADANVEVKDKKSMPRATQNHQSSRPQPRRVLNQKVLEIKDQIIRARAYLGFASPGSSSRLMKELKLRIKEMERALGTATKDSELSRSALQKMRHMEASLSKADRAFPDCTAMATKLRAMNQKTEGEIRYQQRETTYLVHLAARTTPRGVHCLSMQLTADYFALRPEYRKLPNENKINDPKLHHYVVFSDNVLACAVVVNSTISNAKKQGKLVFHVVTNSLNFPAIWMWFLLNPPGKATVHIQSIENFEWLLKYNTFKEQNSSDPRFTSELNYLRFYLPDIFPTLNKVVLFDHDVVVQQDLSRLWNVNMKGKVNAAVGTCQEGETSFHRMDTFINFSDPFIANRFDVNACTWAFGMNLFDLQQWRRQNLTALYHSYLQMGSERPLLKTGSLPLGWLTFYNKTMILDKRWQILGLGYDSDVDKNQIEWAAVIHFDGIRKPWLDIAMGRYRSYWTKFVEFDHPILQRCNLQA* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0157 624 SUPERFAMILY Nucleotide-diphospho-sugar transferases 338 621 IPR029044 -
Vra3g0157 624 Coils Coil 216 236 - -
Vra3g0157 624 PANTHER HEXOSYLTRANSFERASE 1 623 - -
Vra3g0157 624 MobiDBLite consensus disorder prediction 145 184 - -
Vra3g0157 624 MobiDBLite consensus disorder prediction 150 170 - -
Vra3g0157 624 Pfam Glycosyl transferase family 8 306 598 IPR002495 GO:0016757
Vra3g0157 624 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 315 614 IPR029044 -
Vra3g0157 624 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 623 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0157 Vra-Chr3 1770396 1776042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0157 1 624 Glycosyltransferase AT1G06780 49.062 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0157 K13648 - gmx:100793193 954.125