Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0155 ATGGCTTCATCGATGGCAACCATGTTCGTCCCTTTCCCCCAAACACAGAAGAGCCAAGCCCGCAGCTTTCTATCCCAACCACCAAACACAGTAAAGAAACTCAAACCCAAACACACCAAAGCTTTAAAAACTTACGCAACCAGCGTAACATGCAATGCCACGCTTTCATCTACCGTGGAGACCATTGAGGGAGGGAAGAAACAAAAGGAAGTGGCGGAGGTGTGGCGCAAGATCCACGGGGAGGACAACTGGGCCGGCCTTCTGGATCCCTTGGACCCGTTATTGCGGACCGAACTGATCCGCTACGGGGAGATGGCCCAGGCCTGCTACGACGCCTTCGACTACGACCCCTACTCCAAATACTGCGGCAGTTGCAGGTTCTCCATACCCGAGTTCTTCCAAAGCCTCGACATGCCCAACGTGGGATACAACGTCACACGTTATCTCTACGCCACGGCCAACATCAACCTCCCAAATTTCTTCAAGAAATCGCGGTGGCCGGACACGAGGTGGAGCCAGCACGCGAACTGGTCGGGCTTCATCGCGGTGTCGGACGACGCGACGAGCAAGCGTCTGGGGCGGAGAGACATCACGATAGCGTGGCGAGGGACGGTGACGAACGTGGAGTGGGTGGCTGACCTGACGAATTTCCTGAGACCAATCGCTCCCCACATCCGGAGTCCCGACGAGGGTATAAAGGTGGAAGCTGGTTTCTTGGATCTTTACACGGACAAGGAACAGGAGTGTGGGTATTGTAAGTACTCAGCGAGGGAACAGGTTCTCGGGGAGGTGAAACGGTTGATGGCGATTTATTCGGATGAAGAGGTGAGTATTACGATAACGGGGCATAGTCTGGGGAGTGCGATGGCGATACTGAGTGGTTTCGATATTGTGGAAAATGGGGCGAGTGTGGGAAAGAGTGGGAGAAAAACGCATGTTTCGGTGTTTTCGTTTTCGGGGCCGAGGGTGGGGAATGCGAAGTTCAAGGAGAGGTTGGAGGGGGAGCTGGGGGTAAAGGTGCTGAGGGTGCATAACAAGCACGACCTTGTGCCGCAGTCGCCGGGGTTGCTGTTCAACGAGGGGTTGCCGCCGTGGCTGGTGAAGCTCTTGGATTGGTTGCCATGGTGTTATTTGCACGTTGGCCAGGAGCTGGAATTGGATCATAAACAATCACCTTTCTTGAACCCCAATGGGGATGCTGCCTGCGCCCATAACTTGGAGGCTCACTTGCACTTGCTCGATGGATACCATAGGAAGTACGATCCATTTAAGAGAACGAGTGAGAGAGACATTGCTTTGGTGAACAAGGCCTGTGACTTCTTGAAGGACGAGTATACAGTGCCACCAAACTGGAGGCAAGACCTGAACAAGAACATGATGAAGACTGAAAATGGACGGTGGATGTTCACCGATCGTCAAGTGTCTCAAGATCCACACCACCAAGATATTGATCCCCATCTCCAGGAACTCGGTCTCCTCTCTTCTGACAGATCAATCAATAAGTAA 1506 0.5319 MASSMATMFVPFPQTQKSQARSFLSQPPNTVKKLKPKHTKALKTYATSVTCNATLSSTVETIEGGKKQKEVAEVWRKIHGEDNWAGLLDPLDPLLRTELIRYGEMAQACYDAFDYDPYSKYCGSCRFSIPEFFQSLDMPNVGYNVTRYLYATANINLPNFFKKSRWPDTRWSQHANWSGFIAVSDDATSKRLGRRDITIAWRGTVTNVEWVADLTNFLRPIAPHIRSPDEGIKVEAGFLDLYTDKEQECGYCKYSAREQVLGEVKRLMAIYSDEEVSITITGHSLGSAMAILSGFDIVENGASVGKSGRKTHVSVFSFSGPRVGNAKFKERLEGELGVKVLRVHNKHDLVPQSPGLLFNEGLPPWLVKLLDWLPWCYLHVGQELELDHKQSPFLNPNGDAACAHNLEAHLHLLDGYHRKYDPFKRTSERDIALVNKACDFLKDEYTVPPNWRQDLNKNMMKTENGRWMFTDRQVSQDPHHQDIDPHLQELGLLSSDRSINK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0155 501 Pfam Lipase (class 3) 199 356 IPR002921 GO:0006629
Vra3g0155 501 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 492 - -
Vra3g0155 501 Gene3D alpha/beta hydrolase 74 482 IPR029058 -
Vra3g0155 501 SUPERFAMILY alpha/beta-Hydrolases 98 414 IPR029058 -
Vra3g0155 501 PANTHER PHOSPHOLIPASE A1 1 492 - -
Vra3g0155 501 CDD Lipase_3 131 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0155 Vra-Chr3 1760490 1763402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0155 66 492 Acyl Lipid Metabolism Gene Families AT2G30550 59.259 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0155 - - gmx:100815007 763.837