Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0128 ATGTCGTCGTTACTAGTAGATTTGCTCCGCCAAAGTGGCGGCACCGCCATCATCGACGGTGGTCTTGCGACGGAGCTGGAGCGCCATGGTGCGGACCTCAACGATCCCTTATGGAGTGCCAAATGCCTCTTTTCCTCTCCTCACCTCATTCGCCAGGTGCACCTTGATTATCTGGAAAATGGCGCTGACATTATAATCACAGCGTCTTATCAAGCCACCATTCAAGGTTTTAAAGACAAAGGTTATACTGGTGAAGAGAGTGAAGCCATGCTTAGAAGGAGTGTTGAAATTGCTCGCGAGGCGCGTGAATTGTACTATAAAGGATGCTCTGAATGCTGTTCGGGTGATAAGGCTGAGGGTAAAATCCTCAAACAACGGCCTATCCTGATTGCTGCGTCAGTGGGGAGCTATGGAGCTTATTTAGCCGACGGATCAGAGTACAGTGGTGATTATGGTGATGCTATCACGAAGACAAATCTGAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCAGGCGCTGACCTGCTTGCATTTGAAACAGTGCCCAATAAGCTTGAAGCTGAGGCTTATGCTGAGCTTCTGGAAGAAGAGGACATCAAAATTCCAGCATGGTTTGCTTTTAACTCTAAGGATGGAGTAAATGTTGTTAGCGGTGATTCTCTATTGGAATGTGGCTCTATTGCTGAATCATGCAATAAAGTTGTTGCTGTTGGAATTAACTGTACCCCACCTAGATTTATACATGATCTGATTGTTTTGCTCAAGAAGGTGACAACAAAACCAATTGTGATATATCCAAACAGTGGGGAAACTTATGATGCTGAACTAAAACAGTGGGTGCAAAATACCGGTGTTACAGATGAACATTTTATCTCATATGTTACTAAATGGCGTGAGTTAGGGGCTTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCAGCTACTATAAGGAAGATATACAATGTACTGTCTAGCAGTGAATCTGCTATTGTTGGGAAAGAGTGA 1014 0.4428 MSSLLVDLLRQSGGTAIIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKDKGYTGEESEAMLRRSVEIAREARELYYKGCSECCSGDKAEGKILKQRPILIAASVGSYGAYLADGSEYSGDYGDAITKTNLKDFHRRRVQILADSGADLLAFETVPNKLEAEAYAELLEEEDIKIPAWFAFNSKDGVNVVSGDSLLECGSIAESCNKVVAVGINCTPPRFIHDLIVLLKKVTTKPIVIYPNSGETYDAELKQWVQNTGVTDEHFISYVTKWRELGASLVGGCCRTTPATIRKIYNVLSSSESAIVGKE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0128 337 ProSiteProfiles Homocysteine-binding domain profile. 4 326 IPR003726 -
Vra3g0128 337 Gene3D - 6 324 IPR036589 -
Vra3g0128 337 SUPERFAMILY Homocysteine S-methyltransferase 9 328 IPR036589 -
Vra3g0128 337 PIRSF BHMT 275 335 IPR017226 GO:0008168|GO:0008270|GO:0009086
Vra3g0128 337 PIRSF BHMT 5 205 IPR017226 GO:0008168|GO:0008270|GO:0009086
Vra3g0128 337 Pfam Homocysteine S-methyltransferase 17 325 IPR003726 -
Vra3g0128 337 PANTHER ZGC:172121 2 331 - -
Vra3g0128 337 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0128 Vra-Chr3 1439433 1444951 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0128 K00547 - gmx:100790567 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0128 3 1439433 1444951 Vra3g0128 3 1439433 1444951 ECH