Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0125 ATGCTCTCATCCCTCATGGCTTTTCAAATAGGAGTGATTCTGACAGCTTTCATGGTGGGTTTAATAAGTTCGGTTAGTGGACAAGTTAGCACTTCTTGCACAACCTCTATGATGAACAGTATCACACCATGCGCCAACATCATCACAGGAAGTACTAATAATAATGGTTTAAAGCCACCAAGTACGTGTTGTGATTCACTGAGGTCTTTGATGAACACCAACACCAACTGTGCTTGCTTTCTGCTCTCTGCCAATGCTCCATTTTTTCAACTACCCCTCACCCTTGCCCTATCATTTTCACAAGCATGCAACATCAATGGACTTCCTTTGCAGTGCAAAGCTTCTGCTTCTCCTTTACCAGCTCCAGGTCCTGCAGTGCTTCCATCGAACGGTCCAACCCTATCACCCTTGAGCCCACCAGCAGATTCAAAAATGGTTGAAGAAGAGAAATATCAGAAAATTCAATTGGCGGCGGCGTCCTCTCCGGCGGAAGCAGAAGCACCCAGTAGAAGTAGAATTCCACAGATCAGACCAGTGTTGACTCCACTTCCTTCGCCATCTCGTTCATCTTTTCTCTCATCACCACCTTATGCTTTTCTCGTAGGAATCGTGCTTTTGTGCCTCTATTCCTAA 633 0.455 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0125 210 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 110 IPR036312 -
Vra3g0125 210 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 202 IPR043325 -
Vra3g0125 210 Pfam Probable lipid transfer 19 112 IPR016140 -
Vra3g0125 210 Gene3D - 30 115 IPR036312 -
Vra3g0125 210 CDD AAI_LTSS 41 105 - -
Vra3g0125 210 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE 13 202 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0125 10 123 Lipid Metabolism Gene Families AT2G48140 45.690 2.10e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0125 - - gmx:100786841 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0125 3 1418835 1420035 Vra3g0125 3 1418835 1420035 ECH